Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421758
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Entry
139421758 CDS
T10872
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Pattern recognition receptors [BR:
ocla04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
139421758
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139421758
NCBI-ProteinID:
XP_071028978
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Position
12:100074585..100095715
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AA seq
1105 aa
AA seq
DB search
MSLYGEREEGAPASKMSLSGEREEGGPASIMSLSGEHDTKAKRPIKQERPASPVPSCVSM
KSDKSMGLPILFREGYFSTKQRNQQERSESEILSGQSSQSHQTDLASIFSLLEEKIMTVM
KNELKMFKSILSPELPECFESQKQDKEVVEPEDEKQESSAREGALKITLHVLRKMNQKEL
ADTLEKHSDELAVICQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELYITEGGTGEV
NNEHELRQIETTTRKQARPETAIKCNDIFTPLTGQDKRIRTVLTKGVAGIGKTVSVQKFI
LDWAEGKANQDVQFVFLFPFRELNLMKEDKHTFIELLNHFSIETKKSRISNYNKYKVLFI
FDGLDECRLPLDFQKNKICCDVTESTSVDVLLTNLIKGNLLPSALLWITTRPAAANKIPS
WCFDQVTEVRGFNDPQKEEYFRKRFSDEDLANRIISHIKTSRSLHIMCHIPVFCWISAIV
LEHILKHKREEMPKTLTEMYTHLVVFHTTQKNEKYLGKEETGPHWNKESILSLGKLAFQQ
LVKGNQIFYEEDLKEAGIDINEASVYSGLCTQLFKEECGLYQDKVYCFVHLSIQEFLAAV
YVFLSFINNNQNLMDKLQTNNKSKVTKLQTTSRIFSVKKRHKPKFTVYKCAVDKALQSET
GNLDLFLRFLLGLSLESNQKHLQGLLTKTRSSSQSHEETVKYIKEKIRENLSPERSINLF
HCLNELNDHSLVEEIQSFLSSGNLSEEELSPAQWSALVFVLLTSEKELDVFDLKKYSRSE
EGLLGLLPVVKASRAVLLSGCVVTEEGCASLVSALRSNPSHLRELDLCNNDLKDSGVKLL
SDGLGNPHCKLETLRLSGCLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSA
GLEDPHCRLEKLNVEHGGENRMKPGLRKYVCDLTLDLNTVNRHLSLSEGNRKVTCRREKQ
PYPDHPERFEDCRQVLCREGLTGRCYWEVEWSGRGAVIGMTNKGISRRGGGGCWLGWNDK
SWSLICSDNSYSACHNNNSSTITTIDVPSSSPHRVGVYLDWSAGTLSFYRASSDTLTHLI
TFTSTFTEPLYPGFYVCVDSSVSLK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctatggggagagagaggagggggcccctgcctctaaaatgagtctctctggg
gagagagaggagggaggccctgcctctataatgagtctctctggggaacatgacaccaaa
gctaagagaccaatcaagcaggaaagaccagcctcccctgtacccagctgtgtgtccatg
aagagtgacaagtctatgggtctacctatactgtttagagagggatacttttctactaaa
caaagaaaccaacaggagagatcagagtcagagattctcagtggtcagtcttcccagagt
catcaaacagacctggcctccatattcagtttgcttgaagagaaaattatgacagttatg
aagaacgagctgaagatgttcaagagtattcttagtccagaactcccagaatgctttgag
agtcagaagcaggataaggaagtggtggagcctgaagatgagaagcaggagagcagtgcc
agagagggggctctgaagatcacactgcacgtcctgaggaaaatgaaccagaaggagctt
gctgacacactggagaaacattcagatgagcttgctgtgatttgccaacgtgaactcaaa
tctaatctaaagaagaagtttcaatgtgtatttgaggggatcgctaaacaaggaaaccca
acacttctcaataagatctacacagagctctacatcacagagggtggaacaggagaggtc
aataatgaacatgagctgagacagattgagacaacaaccaggaaacaagcaagaccagag
actgcaatcaaatgtaacgacatcttcacacccttaactggacaagacaaacgtatcaga
actgtgctgacaaagggagtcgctggcattggaaaaacagtctctgtgcagaagttcatt
ctggactgggctgaaggaaaagcaaatcaggatgtccaatttgtatttttattccctttt
cgtgagctgaatttgatgaaagaggacaaacacactttcattgaacttcttaatcacttc
tcaattgaaacaaaaaaatcaagaatctccaactacaacaagtacaaagttctgttcatc
tttgatggtctggatgagtgccgactgcccctagacttccagaagaacaagatctgttgt
gacgtcacagagtcaacctcagtggatgttctgctgacaaatctcatcaagggaaatctg
cttccctctgctctcctctggataactacccgacctgcagcagccaataagatcccttca
tggtgttttgaccaggtgacagaggtacgagggttcaatgacccacagaaggaggagtac
ttcaggaagagattcagtgatgaggacctggccaacagaatcatctcacacataaagaca
tcaaggagcctccacatcatgtgccacattccagtcttctgttggatttctgcaattgtc
cttgaacacatactgaaacataagagagaagagatgcccaagacgctgactgagatgtac
acacaccttgtggtgtttcataccacacagaagaatgaaaagtatcttgggaaagaagag
acaggtccacactggaataaagagagcattctgtcactgggaaaactggcttttcaacag
cttgtgaagggcaatcagattttctatgaagaagacctgaaagaagctggtattgacatt
aatgaagcctcagtgtactcaggattgtgcacacagctctttaaagaggaatgcgggctg
taccaggacaaggtgtactgctttgtgcatctgagcattcaggagtttctggctgctgta
tatgtgttcctctcattcatcaacaacaatcagaatctaatggacaaactgcaaacaaac
aacaagtctaaagttacaaaactgcaaacaacgtccaggatattttctgtgaagaaaaga
cacaagcctaaatttactgtctacaaatgtgctgtggataaagccttacaaagtgagaca
ggaaacctggaccttttcctccgcttccttctgggcctctcactggagtccaatcagaag
cacttacaaggtctactgacaaagacaagaagcagctcacagagccatgaagaaacagtc
aagtacatcaaggagaagatcagggagaatctctctccagagaggagcatcaatctgttc
cactgtctgaatgaactgaatgaccattctctagtggaggagatccaaagcttcctgagc
tcaggaaatctctcagaagaagaactgtcacctgcacagtggtcagctctggtctttgtg
ttgctgacttcagaaaaggagctggatgtgtttgacctgaagaaatactccagatcagag
gaaggtcttctggggctgctgccagtggtcaaagcctccagagctgttctgctgtcaggc
tgtgtagtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaacccctca
cacctgagagagttggatctgtgtaacaatgacctgaaggattcaggagtgaagctgctc
tctgatggactggggaatccccactgtaaactggagactctgaggctgtcaggctgtcta
gtcacagaggaaggctgtgcttctctggtctcagctctgaggtcaaacccctcacacctg
agagagctggacctgagctacaatcacccaggagactcaggagtcagactgctctctgct
ggactggaggatccacactgcagactggagaaactcaatgtggaacatggtggagagaac
agaatgaaacctggacttagaaaatatgtctgtgatctcacactggacctaaacacagta
aacagacacctctctctgtctgaggggaacagaaaggtgacatgtaggagagagaagcag
ccgtatcctgatcacccagagagatttgaggactgtagacaggtgctgtgtagagagggt
ctgactgggcgctgttactgggaggtagagtggagtgggagaggtgctgttattggaatg
acaaataaaggaatcagcaggagaggagggggtggctgttggcttggatggaatgacaag
tcctggagtctgatctgctctgacaacagttactctgcctgtcacaataataattcctct
accatcactaccatagacgtcccctcctccagcccccacagagtaggagtgtatctggac
tggtcagccggcactctgtccttctatagagcctcctctgacacactgacccacctgatc
acattcacctccacatttactgagcccctctatccagggttttatgtttgtgttgactcg
tcagtgtccctgaaataa
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