Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421834
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Entry
139421834 CDS
T10872
Name
(RefSeq) BDNF/NT-3 growth factors receptor-like
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139421834
04020 Calcium signaling pathway
139421834
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139421834
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139421834
Protein kinases [BR:
ocla01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
139421834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRR_8
C2-set_2
LRR_5
ig
LRR_4
LRRCT_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
139421834
NCBI-ProteinID:
XP_071029054
LinkDB
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Position
12:16854828..16880106
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AA seq
799 aa
AA seq
DB search
MGYNVWGYGMARSGIFIVLMGLWRFSSACPASCTCSISRLVCIDPDPGIEDFPILTLDDM
EMDINITDIYIANQNQLFDINDNSLKYYSNLRNLTVTNTGLTSISSEAFFNNTRLQYLNL
RDNNLSTLSWRTFINLNMTSFPLLSGNPLECVCENMWIKLRLQEDIDSSESQQLKCIDDL
GVRRAISRLIIPDCEAPAVEVSPSIVTKMEGSDVTAVCSATGSPAPEISWNLDTIFTSYE
VNILELESNLTLSGLSPSDNGRVITCNVENVVGQTEAYLQLNILFCPTILELLEPLRLHH
WCIPFSVTGNPKPELQWYHQDQELHEQEYIKTEIHKSLGSVHHGCLQLANPTHIHNGQYT
LVARNEFGEDQKVIDAHFLLPPDEGDYPSDMYVYSPLPPIDDSVAVYLVVGIAGVALIVC
VLMVIILKYGRNSNKFGMKGSSSSVISNDDDSASPLHHVSNGNNTPSSSEMSHDAVIIGM
TKIPVIENPQYFRQSGSMLKSDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLTPDQD
KILVAVKTLKEASESGRADFHREAELLTNLQHEHIVTFYGVCVDSDPLIMVFEYMKHGDL
NKFLRSHGPDMVLMADGQHSLMVELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL
VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRRFTTESDVWSLGVVL
WEIFTYGKQPWYQLSNNEVIECITQGRVLQKPRSCPKEVYDLMLGCWQREPYMRLNIKEI
HSLLQNLSKASPVYLDILG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggctacaacgtatggggatatggaatggctcgctcgggaatctttatcgtgttgatg
gggttgtggaggtttagctctgcttgccctgcatcctgcacttgcagcatctcaaggctt
gtttgtatcgatcctgacccagggatcgaggatttccctatccttacgttagatgacatg
gaaatggacatcaacatcaccgatatatacattgcaaatcaaaatcaactatttgacatt
aatgataacagcttgaagtactactcgaatctcagaaatctaactgtgacaaatacggga
ctgacttctatctcatcagaagcctttttcaacaatacaagacttcaatatctgaatctg
agagacaataacttgtcaacactgtcctggaggacattcataaacttaaacatgacatct
tttcctctcctgtctggtaaccctctggagtgtgtatgtgagaacatgtggatcaaactg
aggctgcaagaggacattgacagttcagaaagtcaacagctgaaatgcatagacgacctt
ggagtgaggagggccatctccagattaattatccctgattgtgaggctcccgcagtggag
gtcagtccctctatagtcacaaagatggagggaagtgatgtcacagcagtgtgcagtgca
acagggtctcctgcccctgaaatctcgtggaatttggacaccatcttcaccagctatgag
gtcaatatcttggagctggaaagcaatctgacactgtcaggtctctcgccttcggacaac
ggcagagtgatcacttgcaatgtggagaacgtagtcggccaaaccgaggcttacctccaa
ctcaacatcctcttttgccccactatcctggagctgctggagccattgagactccaccac
tggtgtatccctttcagtgtgactgggaaccccaagcccgagctgcagtggtaccaccag
gaccaggagctccacgaacaagagtatatcaagactgagatccacaagagccttggaagc
gttcaccacggctgcctgcagcttgccaacccgactcacatccacaacgggcagtatacg
ctggtggccaggaacgagttcggggaggaccagaaagtaattgacgcccacttcctgctc
ccgccagacgagggcgactatccctcagacatgtatgtatactcaccactacccccaata
gacgacagtgttgcagtgtacctagtggtgggaatcgctggtgtggcattaattgtatgt
gttctgatggtgatcattctgaaatacggaagaaactctaataagtttgggatgaagggc
tcctcctcctcggtcatcagtaacgatgatgactctgccagtcctcttcatcacgtctca
aacggcaacaacaccccgtcgtcctcggagatgagccacgatgcggtgatcattggaatg
acaaagatccctgtcatcgagaacccgcagtattttcgccaatctggcagcatgctgaaa
tcggacacatttgtccagcacatcaagagacacaacattgtgctgaagcgtgagctggga
gagggggcctttgggaaggtgtttctggctgagtgctacaacctgactccagatcaggac
aagatcctggtggctgtcaagacgttgaaagaggccagcgagagcggccgtgctgacttc
caccgggaggcggagctgctgaccaacctgcagcacgagcacatcgtcaccttctacggc
gtgtgtgtggacagcgacccgctcatcatggtgttcgagtacatgaagcacggcgacctc
aacaagttcctcaggtcccatggtcctgacatggtgctgatggctgatgggcagcacagc
ctgatggtggagctgacccagtcccagatgttgcacatcgcccagcagattgctgcaggc
atggtctacctggcctcccagcactttgtccacagagacctggccacacgcaactgtcta
gtgggagagaacctgctggtcaagattggggactttggaatgtccagggacgtgtacagt
accgactactacagagtggggggtcacaccatgctgcccatccggtggatgcctcctgag
agcatcatgtaccggcggttcaccacggagagcgacgtctggagtctgggcgtggtcctc
tgggagatcttcacctatgggaagcagccctggtaccagctctccaacaatgaggtgatt
gagtgcatcacccaggggcgcgtgctgcagaagccgcgttcttgtccaaaggaggtgtac
gacctgatgctgggctgctggcagagagaaccctacatgagactgaacatcaaagagatc
cacagcctgctccagaatctgtccaaggcctcgcctgtctacctggatattctgggctga
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