Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421843
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Entry
139421843 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139421843
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139421843
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139421843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
LST1
Motif
Other DBs
NCBI-GeneID:
139421843
NCBI-ProteinID:
XP_071029066
LinkDB
All DBs
Position
12:complement(4683884..4691596)
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AA seq
269 aa
AA seq
DB search
MDGNNECGEVDYLLQDEDSLIEGVSNPVLFVVVLSVTFLCGLVTLLCRNEQHNIHPENQE
HVRAVRQQLQSESQEAEPAEPRRQFYTDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWR
YGTWFGAINCPICRQMVTLLFPLFHEQVSPQQVQDGTVEPLLILRDLGDYNRRFSGQPRS
LMDRLRDVPTLLRHLFREMFSVGGLFWMFRIRVLLCLIGALTYLISPLDFIPEALFGLLG
FLDDFFIILLLFIYISIMYREVVTQRLAG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaacaatgaatgtggcgaggtggactatttgctgcaagatgaagactcactc
atagaaggagtcagcaaccccgtcttgtttgtggtcgttctcagtgtcacgttcctgtgt
ggactggtaactctgctctgcagaaatgagcagcataacatccacccagagaaccaggaa
catgtccgtgccgtccggcaacagctacagtccgaatctcaggaagctgaaccagctgaa
cccaggcgacagttctatacagacatgtcctgtccagtgtgtctacagcaggccgtgctg
cctgtggaaaccaactgtggccacctcttctgtggttcttgtataattgcgtattggaga
tatgggacatggttcggtgcgatcaattgtcccatctgcagacaaatggtgaccctgttg
ttcccgcttttccacgagcaagtgtcccctcagcaggtacaggatggaacggttgaaccg
ctcctcatcctccgggatctcggcgactacaaccgcaggttctccggacaacccagatct
ctgatggaccggctgcgtgacgtccccacgttgctacgccacctcttcagggagatgttc
tccgtagggggcctgttctggatgttccggatccgtgtcctgctgtgtctgatcggggct
ctgacctacctgatctcccctctggacttcatccccgaggctctgttcggtctgctaggc
ttcctggacgacttcttcatcatcctgcttctgttcatctatatctctatcatgtataga
gaggtggtgacccagagactggcagggtga
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