Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421851
Help
Entry
139421851 CDS
T10872
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139421851
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139421851
09143 Cell growth and death
04210 Apoptosis
139421851
09144 Cellular community - eukaryotes
04530 Tight junction
139421851
04540 Gap junction
139421851
09142 Cell motility
04814 Motor proteins
139421851
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139421851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139421851
03036 Chromosome and associated proteins [BR:
ocla03036
]
139421851
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139421851
04147 Exosome [BR:
ocla04147
]
139421851
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139421851
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139421851
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139421851
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139421851
Exosomal proteins of other body fluids (saliva and urine)
139421851
Exosomal proteins of colorectal cancer cells
139421851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139421851
NCBI-ProteinID:
XP_071029078
LinkDB
All DBs
Position
12:complement(9148413..9151422)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHIGQAGVQMGNACWELYCLEHGFQPDGTIHANTAPQLTDSSFGTFFSETGAGK
YVPRAIFLDLEPTVVDEIRNGHYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDSVMD
RMRKMADQCTGLQGFLIFHSFGGGTGSGFGALLMECLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCSFMVDNEAIFDICKRNLGVERPSYTNLNRLIAQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVPEITNACFEPAN
QMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASIKTRRSIQFVDWCPTGFKVGINYQPP
TAVPGGDQAKVQRAVCMLSNTTAIAEAWSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSGDACEDEEDEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatttctgtccacattggccaagcaggagtccagatgggcaatgcatgc
tgggagttgtattgtctggagcatggtttccagccagatgggaccatccatgcgaacact
gctcctcaattgactgactcatcgtttggtactttcttcagtgagactggggctgggaaa
tatgttcccagggccatcttcttagatctggagcctactgttgtggatgagatcaggaat
ggccactaccgtcagctgtatcaccctgaacaactcatcagtggcaaggaagacgctgcc
aataactacgctcgtggccattacaccatcggcaaggagattgtggactctgtcatggac
aggatgcgcaaaatggctgaccaatgcactggactacaagggttcctcatcttccatagt
tttggaggagggaccggctctggttttggggccctgttgatggaatgcctgtctgtggat
tacggcaagaaatccaaactagaattctcagtctaccctgctccccaggtgtccacggca
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactcggactgc
tctttcatggtggacaacgaggccatctttgacatctgcaagcgtaacctgggagtggag
cgaccatcttacaccaacctgaaccgcctcatcgcccagattgtgtcctccatcacagcc
tccctgcgcttcgatggagctctcaacgtagacctgacagagttccagaccaaccttgtg
ccttacccccgtatccactttcccctggtcacctatgcccccatcatctcagcagaaaag
gcctaccacgagcagctctctgtccccgagatcaccaacgcctgctttgagccggctaac
cagatggtgaagtgtgatcccagacgcggcaagtacatggcctgctgcttgctgtaccgc
ggcgacgtggttcccaaagatgtcaacgcagccatcgccagcatcaagacccggcgcagc
atccagtttgtagattggtgccccactgggttcaaggtggggatcaactaccaaccccct
acggcggttcctggaggagaccaggccaaggtccagagggctgtgtgtatgctgagtaac
accacagccatcgccgaggcttggagtcgtctggaccacaagttcgacctgatgtacgcc
aagagagccttcgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gccagagaggacatggctgctctggagaaggactatgaggaggtgggggcagactctggg
gacgcctgtgaggacgaggaagatgaatactaa
DBGET
integrated database retrieval system
