Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421854
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Entry
139421854 CDS
T10872
Name
(RefSeq) retinal homeobox protein Rx3
KO
K09332
retina and anterior neural fold homeobox protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139421854
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139421854
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
139421854
NCBI-ProteinID:
XP_071029083
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All DBs
Position
12:10716071..10718979
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AA seq
313 aa
AA seq
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MWLLGSTPEVMEERLSPSACFVRNPGNNHNTAAARVHSIEAILGFKDENIYNQSVSYNGS
SGKLAERRGNAIMSSLKKEHNTERFDSVCCSSSGASVSPDLPDGEDKLSDDDNPKKKHRR
NRTTFTTFQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKLE
VSSIKLQDTSSLLSFSRSPSQSLGSGLQLEPWLSTAITSTPLQSLPGFITSSSQGLPGAS
SYSPPAFLNSPSFGHHNLPHIGSTRPLPPPPYQCAVAGYMDKLVMEETDPRNSSIASLRM
KAKEHIQSIGKTW
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtggctacttggttcaactcctgaagtcatggaagagcgcctgtcaccttctgcgtgt
ttcgtccggaaccccggcaataaccataacaccgcagcagcgagggttcacagtattgaa
gcaatattgggatttaaagacgaaaacatatataatcaatctgtctcatacaatggatca
tcggggaaactcgccgagcggagagggaacgcaattatgtcatccctgaagaaagaacac
aacacggaacgttttgacagtgtctgctgcagcagttcgggggcctctgttagtcctgat
ttacccgacggggaggataaactgtccgatgatgataacccaaagaaaaagcaccggcgc
aacaggactacgttcacaacctttcagctgcatgagctggagagagcgttcgagaagtcg
cactatcctgacgtctacagcagagaggagctcgcgatgaaagtgaatcttccggaggtt
cgagtgcaggtgtggttccagaaccgtcgggccaagtggcgtcgccaggagaagctggag
gtgagttccattaagcttcaggacacctcctctctcctgtccttcagccgctccccttcc
cagtccttgggctccggactgcagctggagccatggctcagcactgccatcacctccacc
ccactgcagtccctacccggcttcattaccagctcctctcagggcctcccaggagcctct
agctactcccctccagccttcctcaactcccccagttttggacaccataacctgcctcac
attggttctacgcgccctcttcctccacccccataccagtgcgccgtggctgggtacatg
gacaagttagtcatggaagagacggatcctcgtaattctagtattgcgtctctgagaatg
aaggctaaggagcatattcagtctattgggaagacatggtga
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