Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139421964
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Entry
139421964 CDS
T10872
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139421964
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139421964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139421964
04090 CD molecules [BR:
ocla04090
]
139421964
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139421964
CD molecules [BR:
ocla04090
]
Proteins
139421964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
I-set
Ig_2
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
139421964
NCBI-ProteinID:
XP_071029207
LinkDB
All DBs
Position
12:complement(28884846..28940405)
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AA seq
566 aa
AA seq
DB search
MFLPCLRNYPLHKRQHAVFIFLLYSLTGVGGSQVLVPQKVSAVFGKNVTLGCSVEVEANL
SFTQSSWERRLPTGSVTVAVYNPVFGISIPPDYVRRLSFRSPSSHDATIVLEDVGFTDIG
VYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSVALIDEGNETVVATCIAERALPPAEV
SWETDLFGHSEVTMQEEANGTTSTQVHYLWQPTRHVQGQALTCVVRHPALHTDFRIPYQL
NVEYAPDIVVVGYDGDWHVGRESVLLTCKAKANPPAHHFRWIRLDGDMPEGVEILNSTLL
FLRPLQRNDSGVYRCEVANAINLRSRDLRIRIQDPPTTSMPSTTPAPVLTGSASSSTSVG
DKQRVLFTSPTLAALPPANQLGTIVGGAVGGALFLLLLLVLGGVCYLRQRQTFRGDYYTK
QYLGPSDMQKAPPQHELHPSKPANNVFVDKDREEWGDRERNHERDRERLHLHPTSTTIMN
SHNHREPERQSNGRTRATRNGEHHDHDHLRSYPSPHQTSHARYTAPPHPLSNGSPYLSDD
CYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccttgcctcaggaattacccgcttcataagagacagcatgctgtatttatt
tttcttctgtacagcttgacaggtgtggggggcagtcaggtgttggtgccccagaaggtg
agtgctgtatttgggaagaacgtgacgttgggctgtagtgtggaggtggaggccaacctg
agttttacccagagttcctgggagcgccggctgcccacaggctcggtgacggtggcggtg
tacaaccctgtgttcggtatctccatccccccggactacgttcgccgcctgtccttccgc
tcaccctcctcccatgacgccaccatcgtactggaggacgtgggcttcacagacattgga
gtgtacacctgcaaggtggccaccttccccctgggcaacacacaggcctccaccactgtc
agcgtgcttgtggagcccaaggtgtatgtgtcggctggctcggtggctctgatcgatgag
ggcaatgagacggtggtggctacctgcatcgctgagcgggccctcccccctgccgaagtc
tcctgggagacggacctgtttggccattcagaggtgacgatgcaggaagaggccaacggc
accaccagcacccaagtgcactacctgtggcagcccacccgccacgtccagggtcaagcc
ctcacctgtgtggtgcgccatcctgccctgcacacagactttaggatcccctaccagctc
aatgtggagtatgccccagacattgtggtggtaggttatgatggtgactggcacgtgggc
cgcgagagcgtcctgctgacctgcaaagccaaggcaaacccaccagcccaccacttcaga
tggatcagactggacggggacatgccagagggggtggagatactgaacagcacgttgctg
tttctgaggcccctccaaaggaatgactctggagtctacaggtgtgaggttgccaatgcc
atcaacctacgcagcagggacctgcggatacgcatacaagatcctcccaccacctccatg
ccctccaccacccctgcgcctgtcctaactggctctgcctcctcctccacctctgtggga
gacaagcaacgggtcctcttcacctcccccaccctagcagccctgccccctgccaaccaa
ctgggcaccatcgtgggcggagctgtgggcggagccttgttcctcctgctgctgctagtg
ctgggcggggtctgttacctccgacaacgacagaccttccgcggggactactacaccaag
cagtacctagggccttcagacatgcagaaggctcctccacagcacgagctccacccctcc
aagcctgccaataatgtttttgtagacaaggaccgcgaggagtggggcgaccgcgaacgc
aaccacgagcgggaccgcgagcgcctccacctgcatccaacatcaacaaccatcatgaac
agccacaaccacagagagccagagcgccagtccaatggccgcacgagggcgacgagaaat
ggagaacaccatgaccacgaccacctgcgtagctaccccagcccccaccagactagccat
gccagatacactgccccaccacacccgctgagcaacggttccccctacttgtcggatgac
tgctatgacagtggggccgagggggactatgtctctcatatggacggctccgtgatctca
cgcagggagtggtacgtctga
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