Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422050
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Entry
139422050 CDS
T10872
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139422050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139422050
04090 CD molecules [BR:
ocla04090
]
139422050
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139422050
CD molecules [BR:
ocla04090
]
Proteins
139422050
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
Ig_2
C2-set_2
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
139422050
NCBI-ProteinID:
XP_071029289
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All DBs
Position
12:complement(44830126..44843094)
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AA seq
435 aa
AA seq
DB search
MALMRQLCFLVLFVRGSIAVQHLTVMEGETLTMKCRIRNAKGSHVEWKNPDGHVMFFNNQ
KALKDKRYKIINLSDSVFSVSVSDVTFKDGGLYTCLHYIHKVPVVKWVNVTVLGKPKLEI
TEHNGKTAIKCSAVGNGHPPKISWLLESGLEMYAQPQYLLDKNTYSSLDILHVQSYKRRV
TLKCIVRHPALHNSSLMNFVKIGQNPTEESHSTTRASHWLSTGLTEVTTTTVSRWHSTQV
STETPTATALNWPNTEGSPASTPDLQLSTHNWLSVSQTPENTPHNGTGHNSSNAKGSFFN
DTETQKGTGGSALLLIFLVTGLILGLLVVVSLFVIKLRRAHILWKKVLIITENDDSDQSV
ESNRSKSSNEEKQSRGRRGNGLFNIRFTKYVVEEPMATETMTTTTNIKTEEDPEIQVIPQ
KNGATQSPQIKEREL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcactaatgcggcagctttgcttcctagtcttgtttgtaaggggatccattgcagtg
caacatttgaccgtgatggagggtgagacactaaccatgaagtgtcgcattagaaatgcc
aaagggagccatgtggaatggaagaatcctgatgggcatgttatgttttttaataaccag
aaggccctgaaggacaagcgctacaagataataaacttgtctgactccgttttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacattcac
aaagtgcctgtagtgaagtgggttaatgtgacagttttgggtaagccaaaattggagata
acagaacacaatggaaagactgccataaaatgttctgcagtgggaaatggccatcctccc
aaaatctcatggctgttggagagtgggttagaaatgtatgctcagcctcagtatctgttg
gacaaaaacacatattcctccctggatatcttgcatgttcagtcctacaagaggagagtt
acattgaaatgcattgttcgccatccagccttacacaattcatccctgatgaattttgtg
aaaattggacagaatcccactgaggaatcacactccactacgagagcctctcattggctc
agtacaggtctaacagaggtaacaacaacaacagtctcccgttggcatagtacacaggtg
tcaacagaaacaccaacagctacagccttaaattggcccaatacagaaggatcaccagca
tcaacccctgatttacaactcagcactcacaattggttgtcagtgtcccagacaccagag
aacacacctcataatggcacaggacacaactccagcaatgctaaaggaagcttcttcaat
gatacggagacgcagaaaggaactggaggaagtgcgctgttgctcatcttccttgtgaca
ggcctcatccttggtctgctcgtggttgtttcgctcttcgtgatcaagctgaggagggct
cacatactctggaagaaagttttgatcattacagaaaatgacgactcggatcaatctgtg
gaaagcaacagatcaaaatcaagcaatgaagagaaacaatctcgaggaagaaggggcaac
ggactctttaacatcagattcacaaagtatgtcgttgaggaacccatggcaacagagacg
atgacgacaacaacaaacatcaaaacagaagaggatcctgaaattcaagtcatcccacag
aaaaatggagcaacccaaagccctcagatcaaggagagggaactgtaa
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