Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422080
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Entry
139422080 CDS
T10872
Name
(RefSeq) homeobox protein MSX-2-like
KO
K09341
homeobox protein MSX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139422080
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139422080
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GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
139422080
NCBI-ProteinID:
XP_071029327
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All DBs
Position
12:complement(54881747..54885998)
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AA seq
260 aa
AA seq
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MSTHVSLRDSSSSEEDSRPERESTMDDHKTQVTTHHHPFSVEAIMSGRKTHSEFTSKPDN
VSVVTFSKTQNSPYLCRETYSPPEGIRKHFIPPSPVKSESSEPDDCAPWVMSPRFSAQTR
QVSPTCPLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKI
WFQNRRAKAKRLQEAELEKLKMAAKPVLHPGFTLPMPLGVQLHTAVSLYGQSYPYHRPML
PLSPMGLYATPLGYSMYHLT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccatgtgagtttgagggatagcagttcatccgaggaggacagccgacccgag
cgggagagcacgatggatgaccacaaaactcaagtgactacacaccatcatcccttcagt
gtagaggctataatgtcgggtagaaagactcacagtgagtttacaagcaaacccgacaat
gtctctgtggttacattttcaaagactcagaactctccgtacctgtgcagagagacatac
agccctcccgagggaatccgaaagcactttattccaccatcgcccgtaaaatcggagtcc
tccgagccggatgactgtgctccctgggttatgagcccaagattctcagcgcaaactcgg
caggtgagtcctacctgtccgctgagaaagcacaagaacaatagaaagcctcgtactcct
ttcaccacctcccagctgctggctctggagcgtaagtttcgtcagaagcagtacctgtcc
atcgcagagcgggccgagttctccagctctctgaccctgactgagactcaggtcaagatt
tggttccagaaccgccgggccaaggccaagagactacaggaagccgagctggagaagctc
aaaatggctgccaaacctgtgctgcatccgggctttacgttacccatgcccctgggtgtc
caacttcacacagctgtctccctgtacggacagtcctacccctaccaccgaccaatgctg
cccctttcacctatgggactgtacgctacgccgctgggatacagcatgtatcacctaaca
tga
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