KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422150
Entry
139422150         CDS       T10872                                 
Name
(RefSeq) interferon a3-like
  KO
K05414  interferon alpha
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060  Cytokine-cytokine receptor interaction
ocla04217  Necroptosis
ocla04620  Toll-like receptor signaling pathway
ocla04621  NOD-like receptor signaling pathway
ocla04622  RIG-I-like receptor signaling pathway
ocla04623  Cytosolic DNA-sensing pathway
ocla05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    139422150
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    139422150
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    139422150
   04621 NOD-like receptor signaling pathway
    139422150
   04622 RIG-I-like receptor signaling pathway
    139422150
   04623 Cytosolic DNA-sensing pathway
    139422150
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139422150
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ocla04052]
    139422150
Cytokines and neuropeptides [BR:ocla04052]
 Cytokines
  Interferons
   139422150
SSDB
Motif
Pfam: Interferon
Other DBs
NCBI-GeneID: 139422150
NCBI-ProteinID: XP_071029404
LinkDB
Position
12:complement(66360858..66397136)
AA seq 183 aa
MAVLKWLSICLTLFCQGTAASKPCRWTQFRLGKLNDVSIDLLSDMGGLFPLMCAEENFEQ
MFPGDLYKNTEGEDVSVVALEAMRYVDQLYNNSLTPVTWNRTKLNMFQNVIYRQVQNLEL
CVVGGVWESSGDGGSVTLKTYFNKLNTVLKEKEHSACVWEITRVEVPENLVQSKKYLDSR
VKP
NT seq 552 nt   +upstreamnt  +downstreamnt
atggctgtattgaaatggttgagcatttgcctgactctgttctgccaaggcacagcagca
tcaaaaccttgcaggtggacgcagtttaggttggggaagctgaacgatgtgagcatagac
ctgctctcagatatgggtggactctttccacttatgtgtgcagaagaaaacttcgaacaa
atgtttccaggggatctttacaagaacacagagggtgaggacgtctctgtggttgcatta
gaggctatgcgatatgtggaccaattatataacaacagtctgacgccagtcacgtggaac
agaacaaaacttaacatgttccaaaacgtcatatatcgtcaagttcaaaacttagagtta
tgtgtcgtgggtggtgtttgggaatcctctggagatggagggtcggttactctgaaaaca
tatttcaacaagctgaacacggtcttgaaagagaaggaacacagcgcatgcgtatgggag
atcacgcgagtggaggttcccgaaaacctggtgcagtccaagaaatatctcgacagcaga
gtcaagccgtga

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