Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422239
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Entry
139422239 CDS
T10872
Name
(RefSeq) ankyrin repeat and fibronectin type-III domain-containing protein 1-like
KO
K24478
ankyrin repeat and fibronectin type-III domain-containing protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139422239
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139422239
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Motif
Pfam:
fn3
DUF6538
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
139422239
NCBI-ProteinID:
XP_071029516
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Position
12:complement(76671433..76681157)
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AA seq
1076 aa
AA seq
DB search
MSVSVRNPPQRRRSLGPVLPKRIYRNLSVRLRGGEFSFSGETDMPKHPCKAPHTYKNLWE
AVENEDTLAVQSLLCRDRVCGGGGGRDKEKKEKDWEREREKGVNRVSEQGLVPLDVAALT
QNSPLLHVLTKAGARHNPVLCLPAEWLCKLDALVMLADRQVEDRREELLGGAGAGPHVQA
DIQRQLHLWTLRQQLYCRMRESFHHTDLPGPPSSVSLFVTSASSLFVSIREPTGIATGLI
TRYRVEWSTSANFKSILGSAQVIDTKTPVHSITGLTTGMHYSVRVTAYNVKGWGPAQSSS
PVSAALSSWRECMGVKTPSRNKEALARRLLEQTREPHYKGYCIESCKPQSPSKRLSMSRS
LKLLFQSATKFVRLLQRGVYLATVFYRKENILVTADDQLPLVEIQCCSTSVSQDFLWFAK
LSCAWQQVPWLQQALSSALSSSSSLLQNRHNILQAVAQLQSSLGTVDLGQVYYEPLKDRQ
GNVLLVTVKDCAAHTKPPDLPLHWVPLAWLEKNRSRTPLLPEPTAMDTLTEQLKEKLSFH
RRSVQWAQPGLYVGILKLCSTVEQIRVLVPQRLPNLLCHARVRHIPHVSRDEWAWLQSHN
MLTANEDTEDVDETSMDSSGLGDFVRSLRAAVTLLLTKLNIPLYRAYQYGVYTRELLQFG
DKMSMLLLLPPSEDFSSSYWPLVGTKEPGLTMPLQIFELVHFWTYEQNFLSQYCQVWVRL
ELDAHLSQQALREALDTKEVQEARDRLGHITQLSQSLEVVWREARWIMDVLQCVRSKQWV
GAVPLGLVMGGDPPACPDDEEDDRPTTRVWPQRILPQKKISESITCTVTDVGVSSGISEP
IRIPGFHEKAVSLIEGASKGGYPVDLSAQHPVVVFNSLDQSGVGFDIVAQSEVVYHNIMA
QSEVADHDIVNLPAAYSGELEYPHSFVSDVIPPLPEMDIIFPTLSLIDEEREEDPVPGRM
DMLDSLSLGVGESEAFFGLNSDLMRGPKGCSLSDVHHDTNSLTAGLSLRDRTCADTLFSG
HLDGLATSAPLPIVRTTPAQSWDLPTEDTMIHAGNRGGSMPARSQVEWVNSSNQAS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtcggtgagaaacccgccacagcggcggcgctctctgggtcccgttttgcct
aaacgcatctacagaaacctgtcggtcaggctgaggggcggagagttctctttttccgga
gagacagacatgccgaaacatccatgcaaggcccctcacacatataagaacctgtgggag
gcagtggagaatgaggacaccctggcggtgcagagcctgctatgcagggacagagtgtgt
ggcggaggaggaggacgggataaagagaagaaagagaaggactgggaaagagagagggag
aaaggtgtaaacagagtgagtgagcagggcctggtacctctggacgtggctgctctaacc
cagaactcccctctgctgcacgtgttgacaaaggcaggagccagacacaaccccgtcttg
tgtcttccagcggagtggttgtgcaagctggatgccctggtgatgttggccgacaggcag
gtggaggacaggagggaggagctactgggtggagcaggggcggggccacatgtgcaggcc
gacatacagaggcagctccacctctggactctgcggcagcagctgtactgcaggatgagg
gagagcttccaccacacagacctccctggcccacccagtagcgtgtcactgtttgtgacc
agtgcctcttccctgtttgtgtccattcgagagccaaccggtatcgccactggattgatc
acccgctacagagtggaatggagcacctctgccaacttcaagagtatacttggctcagcc
caggtgatcgacactaagacccccgtccacagcatcacaggactcaccacaggaatgcac
tactctgtgagagtgaccgcctacaatgtgaagggatggggcccggctcagagctccagc
ccagtcagtgctgccctctccagctggagggagtgtatgggagtgaaaactccaagcagg
aacaaggaggctctagccaggagactgttggagcagaccagagagccacactacaaggga
tactgtatagagagctgcaagccccagagccccagtaagcgcctgtcgatgtctcgcagc
ctgaagctgctcttccagtcagccaccaagtttgtccgtctcctacagaggggtgtatac
ctggcaactgtgttctacagaaaggaaaacatcctggtcacagcagatgaccagctccca
ttggtggagatccagtgctgctccacctccgtctctcaggacttcctttggtttgccaag
ttgtcctgtgcgtggcaacaggtgccctggctccagcaggccctctcctctgctctctcc
tcctcttcatcactacttcagaacaggcacaatatcttgcaggctgtagcacaactacag
tcctctctggggacagtagacttgggacaggtgtactatgagcctctgaaggacaggcag
ggtaatgtcctgctggtgacagtgaaggattgtgcggcccacacaaaacccccggacctc
cctctccactgggtccccctggcctggctggagaagaaccggagcaggacccctctactc
ccagagcctactgccatggacaccctcacagagcagctcaaggagaagctgtccttccac
agacgcagtgtccagtgggcccagccgggcctgtacgtgggcatcttgaagctgtgcagc
acagtggagcagatcagggttctagtgccccagaggctgcccaacctgctatgccacgcc
agagtgcgccacattccccatgtgtcccgcgatgaatgggcgtggttacaaagccacaac
atgttaacagccaatgaggacacagaggacgtggatgagacctcgatggacagctctggg
ctgggggactttgtgaggtcactcagggccgctgtcactctcctgttgacaaagctcaac
atccccctctacagggcgtatcagtacggtgtgtacactcgggagctgctgcagtttggg
gataagatgtccatgctgctcctgctgccccccagtgaagacttcagttctagctactgg
cccctagtgggcaccaaggagccaggcctcacaatgccactgcagatctttgagctggtg
cacttctggacatacgagcaaaacttcctgtctcagtactgtcaggtctgggttcggttg
gagctggacgctcatctgtcccagcaggctttgcgagaagctttggacacgaaggaggtg
caggaggccagagaccgccttggtcacatcactcagctctcacagagtcttgaggtggtg
tggcgtgaggcccggtggatcatggatgtcctgcagtgtgtccgctctaaacagtgggtg
ggggcggtgcctctgggcctggtcatgggaggagacccacctgcctgcccagacgatgag
gaggatgacaggcctaccaccagagtctggccccagcgcatactccctcaaaagaaaata
tcagagagcattacctgtactgttacagacgttggtgtcagcagtgggatctctgagcca
atacgtatcccggggttccatgaaaaggctgtgagtttaattgagggggctagcaaaggg
gggtaccccgtggacctcagtgcccaacatcctgttgtggtgttcaacagcctggatcag
tcaggagttggattcgacattgtggcccaatcagaagtggtatatcataacattatggcc
caatcagaagtggcagatcatgacattgtgaacctgccagctgcctacagtggagaactg
gagtatcctcacagttttgtcagtgatgtgatcccgcctctaccagagatggacatcatc
ttccccacactgagtctgatagatgaagagagggaggaggaccctgtacctgggaggatg
gatatgcttgacagtttaagtcttggagtcggtgaaagcgaggctttctttggactaaac
tctgacttgatgaggggacctaagggttgctctctctctgatgtgcatcatgatacgaac
tcactgacagcaggccttagtttaagagacagaacctgtgcagatacactgttctcaggt
catttagacgggctggccacatctgcccctcttcccattgtgaggaccacacctgcccag
agctgggatttacctacagaggacactatgatacatgctggcaacagagggggcagcatg
ccagccaggagccaggttgagtgggtgaactcctctaaccaggcctcctga
DBGET
integrated database retrieval system
