Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422285
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Entry
139422285 CDS
T10872
Name
(RefSeq) neuronal pentraxin-1-like
KO
K25709
neuronal pentraxin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
139422285
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Motif
Pfam:
Pentaxin
Laminin_G_3
SlyX
Laminin_G_2
Baculo_PEP_C
DUF16
HOOK
Motif
Other DBs
NCBI-GeneID:
139422285
NCBI-ProteinID:
XP_071029572
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Position
12:complement(79528329..79537587)
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AA seq
438 aa
AA seq
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MQHNTHGEMQTIKKAISWKLFILSYLFVEGSCQDFGVGQTQFICTSVPKDMDICAATLQN
SMPGEDLKTTVMQLRETVLQQKETIMNQKETIRELTSKLTRCEGQSAPEPGPGGRRKETG
TKNTMGDVSRGPSDTLAQLSQTLQSLKQRLENLEQFSRNNNSVQANSLKDLLQSKIDDLE
KQVLSRVNSIEDDKPVLRNETEQRGRVESTLTSLHQRITDLEKGQKENRPLDKFQLTFPL
RTNYMYAKVKKSLPEMYAFTVCMWLKSNASPGVGTPFSYAVPGQANELVLIEWGNNPMEI
LINDKVAKLPFIINDGKWHHICVTWTTRDGVWEAFQDGVMRGSGENLAPYHPIKPQGVLI
LGQEQDTLGGGFDATQAFVGDLANFHIWDRKLSIGEIYNLATCSSKAQIGNVFSWLESSI
DIYGGASKWTFEACRQLN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacaacacacacggcgaaatgcagaccattaagaaggcaatctcttggaaactt
tttatactttcttacttattcgtggagggttcgtgccaagactttggtgttggtcagact
caatttatttgcacgtcggtgcccaaggatatggacatatgcgccgctaccttacaaaac
agtatgcctggagaggatttgaagaccactgtgatgcagcttcgggagaccgtcctacag
cagaaggagaccattatgaaccaaaaagagactatcagagaactgacttccaagttaact
cgctgtgagggccagagtgcgcccgagcccggacctgggggaaggagaaaagagacgggg
accaaaaatactatgggggatgtatcaaggggtccctcggacactttggcgcaactatcg
cagactttacagtctctaaagcagagattagaaaatctcgagcaattcagtcggaacaac
aactcggtccaggcgaacagtctgaaagacctgctacagagtaaaatcgacgatttggag
aagcaggtgttatcccgcgtgaacagtatagaagatgacaagcctgtgctgcggaacgag
acggagcagcgcggtagagtggagtcgactctcacatccctgcaccagagaatcaccgac
ctcgagaaaggtcagaaagaaaacaggccgctggataaattccagttgacattcccgttg
aggaccaactacatgtatgccaaagtgaagaagagtctccctgagatgtacgcattcact
gtctgcatgtggctcaaatccaatgcatccccaggggtgggcacgccgttctcctacgca
gtgccagggcaggccaacgagctggtgctgattgagtgggggaataatcctatggagata
ctcatcaatgacaaggtagctaaattaccattcattatcaacgacgggaagtggcatcac
atctgtgtcacatggacaactcgagatggagtatgggaggctttccaagatggagtcatg
aggggcagtggagaaaaccttgctccataccatccaatcaaaccacaaggtgttctgata
ttgggacaagaacaggatacgcttggagggggctttgatgctacacaagcttttgttgga
gacctggcgaattttcatatctgggaccgaaagttgtctattggagagatatacaacctg
gcaacttgcagcagcaaagcgcagataggcaatgtgttttcgtggttggagagcagcatt
gatatttacggaggagcctccaagtggacatttgaggcttgtcgtcaactgaactga
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