Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422322
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Entry
139422322 CDS
T10872
Name
(RefSeq) homologous recombination OB-fold protein-like isoform X1
KO
K27803
homologous recombination OB-fold protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139422322
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139422322
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Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
139422322
NCBI-ProteinID:
XP_071029617
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Position
12:83481910..83486814
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AA seq
642 aa
AA seq
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MTAMTCKWNGLFNVGEDFDDEDLLEMDWSAPSVSACTVSSAAQSCFLRSTAASTPAAPYG
QNNSHQPSTEGILAHRGLSNGPGSDNSTPNSVGQSPALGLRQLSTSKPLHSFPLPPLHLP
TLSRGLCTVTQQSSSPAQQMKSNTTGQQEAPLPQDGFDDWDVDLADLDESDPQMSTWAQV
RETAPAADLTKPSDDSVSPAKRLRPTACGGAQTGPNVGLRGFSTSNQMSGPPSSSSSILH
RSSFPGPFPSPRPDPSATFLLAPPQSPVLSGLTIASSPFPRPVTHRPVRGLPSQVQRPWA
TPLAQGRSLFGPISPAPSSRFGEPMPSPSLTPRSLHPPIFTNHLIQLVSNSNKTPQRPGS
DHIRPNTRRFPGPAGILPQQLHGQSLDDIVVAIPQTPAHGAVARLPSQVPSSQTEEEDFS
GGPWAAMKAEMGLDERNSSCFLHSYSVAMVLRKAALKQLVKNKVPNMAVVLKSILHTHAD
AKAVFRDPTGEMQGTVHRRLLEDRLGELKTGALLLLKQVGVFSPSHRNHYLNVTPNNLLR
IYPPDGSTLSSTQSQLLPLPPEPKLESSDQSSSVPGAPVSQMELFYDNDDEEDVRAPQVS
ADSGAGSSSVPQGPPAAPLDLSWDADDLDELLGELPVESYCL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatgacttgcaagtggaatggattatttaacgttggggaggacttcgatgat
gaggatctacttgagatggactggtctgctccatcagtgtctgcttgcactgtgtcctct
gcagcacagtcctgtttcctccgttcaactgcagcatcaactcctgctgccccctatggc
cagaataactcacatcaaccatccacagaaggcatacttgcccataggggcctgtcaaat
ggcccagggtcagataattcaacaccgaacagtgtaggacagtctcctgctttgggtttg
agacagctctctacatctaaaccattgcactcattccctcttccccctctccaccttcct
acactgagtaggggactgtgtacagttacccaacagagctcctcaccagctcaacagatg
aagtcaaacacaacaggacagcaagaggcccccttgccgcaggatggctttgatgattgg
gatgttgacctggcagacctagatgaaagtgacccacagatgagcacttgggctcaggtc
cgagaaactgctccagctgcagatctaaccaagcccagcgatgactctgtatccccagcc
aaaagactacggcccacagcctgtggtggtgctcaaaccgggcccaatgtgggtctgaga
ggattcagtacctctaaccaaatgtctggtcctcccagtagtagtagtagtatactccac
aggtcctcattccctggtcccttcccctctccccgccctgatcctagtgctaccttcctc
ctagctccaccccagagcccagtgttatctggcctcaccatagcctccagccccttcccc
aggcctgtgacccacaggccagtcagagggcttccttcccaggtacagaggccctgggct
acacctctggctcagggacgcagcctttttggccctatctccccagccccctctagtagg
tttggtgaacccatgccttcccccagtctcaccccccgttccctccacccgcccatcttc
actaaccacttgattcagctggtgtccaactccaacaagaccccccagagaccgggttct
gaccacatccggcccaatacccgccgcttccccgggcctgcaggaatcctaccacaacag
ctccatgggcagagcctggatgacatcgtggtggccattcctcagacacctgcacatggg
gccgtggctcgactgcccagtcaggttcccagctctcagactgaggaagaggatttcagt
ggaggtccgtgggcagcgatgaaagcagagatgggattggacgaaaggaactcctcctgt
tttctgcactcttacagcgtggccatggtactccgcaaggcggccctgaaacagctggtg
aagaacaaggtccccaacatggctgtggtactaaagagcatcctccacacacacgctgat
gccaaggctgtgttcagggatcccacaggagagatgcagggcacagtgcaccggcgcctc
ctagaggacagactaggggagctcaagacgggggcgttactgctgctcaaacaggtgggt
gtgttctcaccgtcccaccgtaaccactacctgaacgtgacacccaacaacctcctgagg
atctaccctcctgacggctcgaccttgtcctccacacagagccagctgctcccactcccc
ccggagccaaagttggaatcatctgatcagtcatccagtgtcccaggagcccctgtgtct
cagatggagttgttctatgataatgatgatgaagaggatgttcgggccccacaggtctct
gcagactctggtgctggctcctctagtgttccacagggcccgcctgctgcaccactggac
ctgtcctgggacgcagatgaccttgatgagcttcttggggagttgcctgttgagtcctac
tgcctctga
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