Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422343
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Entry
139422343 CDS
T10872
Name
(RefSeq) heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
KO
K07809
[heparan sulfate]-glucosamine 3-sulfotransferase 3 [EC:
2.8.2.30
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139422343
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139422343
Enzymes [BR:
ocla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.30 [heparan sulfate]-glucosamine 3-sulfotransferase 3
139422343
Glycosyltransferases [BR:
ocla01003
]
Unclassified
Sulfotransferases
139422343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Sulfotransfer_2
HVO_B0008_N
Med5
Motif
Other DBs
NCBI-GeneID:
139422343
NCBI-ProteinID:
XP_071029645
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Position
12:88255735..88270962
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AA seq
404 aa
AA seq
DB search
MEYSPIYQNLHFVSSSPVKNKLFVFCIMLSLWVYMIYCCVGYCSTMPSLMVGTASSKHSQ
HLETVDPNRTQPRLQNEGDLESEHQEDPLDSLDPLFGASSRDVLNNESDLDSRGGEDWDE
IRSEQRTLDNNVVSSLFNESGPVESKKLPQAIIIGVKKGGTRALLEFLRVHPDIRAVGAE
PHFFDRNYDKGLEWYRDRMPETQEGQITMEKTPSYYVTKDVPARIHTMSPDTRLIVVVRD
PVTRAISDYTQTRSKKPDIPSFESLAFKNRTTGLIDTSWSAVQIGMYAKHLERWLQYFPK
DQLLFISGERLISDPAGEMTRVQDFLGLRRVVGHKHFHFNPAKGFPCLKRPEGNSKPHCL
GKTKGRIHPNIDPEVVQKLRDFYQPFNRRFYQMTGHDFGWGSWS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaatatagcccaatatatcagaacctgcattttgtctcatcatcccccgtgaagaat
aaactctttgttttctgcatcatgttgtccctgtgggtgtatatgatatattgctgcgtc
ggatactgttcaaccatgccaagtctgatggtcggtacagccagcagtaaacattcacaa
catctcgaaacagttgaccctaacagaactcaaccccgactccaaaacgaaggggacttg
gaatccgaacaccaagaagatccgttagattctttagatccgttattcggcgcatcatcc
agggacgtgttaaataatgagagtgatttggacagcagaggaggggaggactgggatgag
attcgaagcgagcagaggacgttggataataatgtcgtgtcaagtctcttcaacgagtca
gggccggtggagagtaagaagttgccccaggcgattatcatcggggtgaagaagggaggc
acacgggcgctgctggagttcctccgcgtgcatcccgacattagagctgttggggccgag
ccgcacttctttgatcggaactatgacaaggggctagagtggtacagagaccgtatgcct
gagactcaggagggtcagatcaccatggagaagacccccagctactacgtcactaaagac
gtccccgcccgtatccacaccatgtccccagacaccaggctgattgtggtggtccgagac
cccgtcaccagggccatctcagactacactcagacccgctccaagaaacctgacatcccc
tcctttgagagcctcgccttcaagaacagaactacgggtctcattgacacgtcctggagc
gccgtccagatcgggatgtatgccaagcacctagaacgctggctgcagtacttccccaag
gaccagctcctcttcatcagcggggagaggttgatctccgacccagccggggagatgaca
cgcgtacaggacttcctggggctcaggagggtggtcggtcacaaacactttcacttcaac
ccagccaagggcttcccctgtctgaagaggccggaggggaatagtaaacctcactgtctg
ggtaaaaccaaaggaaggattcatcctaatattgaccctgaggtggtacagaagctgagg
gacttttatcaacctttcaacaggaggttttatcagatgacgggacatgactttggatgg
ggttcatggagctga
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