Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422568
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Entry
139422568 CDS
T10872
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139422568
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139422568
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139422568
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139422568
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139422568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
139422568
NCBI-ProteinID:
XP_071029814
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All DBs
Position
12:complement(102965465..103020300)
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AA seq
948 aa
AA seq
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MVGNMCGRKLARRSKSALIVALTVLLVQTLIVWNFSTLDTGEEAGEGANSRREKRDQVGG
INKAYSQYPRSGLPKRHHQPPLGKTAVRHKQQPEGYHSWRPKEKVLLDSNNNENSVPKDF
DTVVDGNSNLGARSLSERQRMAGNTAKHKPDKALRQGILGKAFPNDVNEVIQQYPLPPQQ
PGGAGLKDYHAYKRPRPHSQLSTKPARPSPSPSIKTSNQHQRHHQPRKSATAAPVRGQRR
EKHQCEISGKEAISALSRAKTRECRQQIAEVYCRHKERTLMPETVPRYCTIEGKANVNVQ
WDEGSEQTAPAVPVRIVFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVG
ALASQYSNVRVTSWRMSTIWGGASLLTMYLRCMDDLLKMADWNWDFFINLSAADYPIRTN
EQLVGFLTKYRDMNFIKSHGRDNTRFIRKQGLDRLFFECDTHMWRLGDRKIPEGIAVDGG
SDWFLLNRMFVDYIINSEDELVVSMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRI
TNWNRKLGCKCQYKHIVDWCGCSPNDFKSPDLPRFQQTSRPTFFARKCEASVNQEIVTQL
DSFLFGPYPQETPGLQSYWENVYDETDSVASLSDSQLTHYHAFTRMGLSRAATSLQGHPD
NNSCRYIPRGHPVSVHLYFLSDVFQGYLVRQHASNLATSQLETLETWVSHSNHFTLAPAT
NTLNRLQFAEVGTDWDAKERIFRNFGSLLGPTEEPVAMQRWGRGQNVTVTVVWVDPTNVI
AATYDILVDGGTESTHYRPPLTVPLRPGVWTLRVLHHWNLLASTSFVVSPLEHHGQQPIR
QEDTVKLHSGPVRNSYMDQSFHGLNPILNLPVHLGQVEEAEFKASLTGAELQSWVDHLLA
GVWSAADVCSQGPSSCPVMQRCRETGWSALSPDPKSDLGPPRGNGRIR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcaatatgtgcggtcgcaagctggctcgccgctccaaatcagcgctgatagtc
gcgctgacagttctcctggttcagacgctgatcgtgtggaactttagtaccctggatacc
ggggaagaagcgggcgaaggggccaatagtaggcgggagaagagggaccaagtcgggggc
atcaacaaagcctacagccagtacccccggagcgggctgccaaagaggcatcaccaacct
ccgcttgggaaaacggctgtccgacacaagcaacaaccggagggctaccactcctggcgt
cccaaggagaaagtcctcctggatagtaacaacaatgagaactcggtccccaaagacttt
gacactgttgttgacggcaacagcaaccttggggcgcggtcactgtctgagcgccagcga
atggcaggaaacaccgccaaacacaaaccggacaaggccctaaggcaaggcattctggga
aaggcctttcccaatgatgtcaacgaggttattcagcagtaccctcttcctccacagcag
cccggaggagcaggacttaaagattaccacgcatacaaacgacccagaccacactcccag
ctgtccactaaacccgctagaccctccccctctccctccatcaaaacatccaatcagcat
cagcgacatcaccaacccaggaagtcggcgaccgcggctcctgtgcgggggcagcggagg
gagaagcaccagtgcgagatcagtgggaaggaggccatctcggctctgtcgagagccaag
accagggagtgtcgtcagcagatagctgaggtgtactgcagacacaaggagaggacactg
atgccggagaccgtccctcgatactgcaccatagaaggtaaggccaatgtgaatgtacag
tgggatgagggttcagagcagactgcccctgctgtgcctgttcgcatcgtcttcgtcttg
gtggtccatggcagagcgtctcggcagttccaacgcctgttcaaggccatctaccatacc
tcacactattactatatacatgtagaccagcgttccaactacctccacagacaggtgggg
gctctagcgagccagtactccaacgtccgtgttacttcctggaggatgtccaccatttgg
ggcggggcgagcctgctcaccatgtacctgcgttgcatggacgaccttctcaagatggcc
gactggaattgggacttcttcatcaatctcagtgcagccgactaccctatcaggaccaat
gagcagctggtgggcttcctgacaaagtaccgggacatgaacttcatcaaatcccacggc
agagacaacacacggttcatccgtaagcagggtctggaccggctcttcttcgagtgtgac
acacacatgtggcgcctaggcgaccgcaagatcccagaaggcattgcggtggacggaggt
tccgattggttccttctgaaccgcatgtttgtggattacatcatcaactctgaagatgag
ctggtcgtcagcatgaagcgcttctacgcatacacactgctgcctgccgagtcgttcttc
cacacagtgctagagaacagtgctcactgtgagagtatggtggacaacaacctgcgtatc
accaactggaacaggaagctgggctgtaagtgtcagtacaaacacatcgtagactggtgc
ggctgctcccccaatgacttcaaatctcctgacctgccacgctttcagcaaacgtccagg
cctacgtttttcgcccgtaaatgtgaggctagcgtgaaccaggagattgttacccagctg
gacagcttcctgtttggcccttatccacaggagaccccagggctccagtcgtactgggag
aatgtgtacgatgagacggacagcgttgccagcctatcagacagccagctcactcactac
cacgccttcacacgcatgggcctatcacgggccgccacgtcactgcagggtcaccctgac
aacaacagctgcaggtatatccccaggggccacccggtgtctgtccatttgtacttcctg
tcagacgtgttccaaggctacctggttcgtcaacatgctagtaacctagcaaccagccag
ctagagaccctagagacttgggtctcccatagcaaccacttcaccctggccccggcaacc
aacacactcaacagactacagtttgcagaggtgggtacagactgggacgccaaagagaga
atcttcaggaacttcggaagcctcctgggccccacggaggagccggttgccatgcaacgc
tggggccggggacagaacgtcacggtaaccgtggtctgggtggaccccaccaacgtcata
gccgccacgtacgacatcctggtggacggcgggacagagtccacacactaccggcccccg
ttaaccgtgccgttacgacccggcgtgtggacgctgcgtgtgttgcatcactggaacctg
ctggcctccaccagctttgtggtttcacctctggagcaccacggccagcagcctatacgc
caggaagacacagtgaagctccacagcgggccggtccgtaactcctacatggatcagagt
ttccacggcctcaaccccatcctcaacctcccagtgcacctgggacaggtggaggaggcg
gagtttaaagcatcactgacaggggcggagctccagagctgggtggaccatctcctggca
ggggtgtggtctgcagcggacgtgtgttctcagggtcctagctcctgtcccgttatgcag
cggtgtcgggagacgggatggagcgcgctcagtcccgaccccaagtctgatctgggtccc
cccagagggaacggacggattaggtag
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