Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422582
Help
Entry
139422582 CDS
T10872
Name
(RefSeq) intraflagellar transport protein 70A
KO
K19683
tetratricopeptide repeat protein 30
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139422582
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
139422582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
ANAPC3
TPR_1
TPR_7
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_6
ARM_TT21_C
TPR_Slam
ARM_TT21_2nd
UVSSA_N
TPR_EMC2
DUF6891
TPR_11
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
139422582
NCBI-ProteinID:
XP_071029826
LinkDB
All DBs
Position
12:complement(103168021..103201073)
Genome browser
AA seq
651 aa
AA seq
DB search
MTLTTIKDGEYTATVYKMIKDGRYGEAIHILSNELQKQMKSRAALSLLGYCYYHMQDFTN
AAECYEQLTQLHPEVEEYRLYYAQSLYGACAYPEAMKATFLLDNPTSHTKMIKLQASIKY
GEEEYSGAKTLVEQLPQDDPDYDVDMGCLLYKEGEYEEACKKFMSAMQVLGYQPELSYNI
GLCYYSMKQYGQALKFIGEIIERGIREHPELSVGMTTEGIDVRSVGNTLILHETALIEGF
NLKAAIEYQLKNCDAAQEALTDMPPRSEEELDPVTLHNQALMNMDKKPSEGFEKLAFLLQ
QIPFPPVTFGNLLLLYCKYEYFDLAADVMAENAHLTYKFLTPYLYEFLDAMLTCQTAPEE
AFRKFDEMNAKLTDQLRKLTKQIQEARLARDTEALKKTLQDYDEMVEKYIPVLMAQAKIY
WNRENYQMVEKIFRKSVEFCNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNIL
NVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVFHLCIVNLVIGTLY
CAKGNYDFGITRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENTAKHMIMIRDSVVQECIQ
FLEHCEVYGKTEPAMIEQPLEEDRMHIGKNTVTYESRLLKALFYEVIGWNQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacactgacaacgattaaagacggcgaatacaccgccaccgtctacaaaatgatcaaa
gatgggcggtatggagaggctatccacatcctcagcaatgaactgcagaaacagatgaag
tcacgggcagccctgtctctgctaggctactgctactaccacatgcaggacttcaccaac
gcagcagagtgctatgagcagctgactcagctacacccggaggtggaggagtacaggctg
tattacgcccagtctctgtacggggcctgtgcctaccccgaggccatgaaggctaccttt
ctattggacaaccctaccagccacaccaagatgatcaaactgcaggcatccatcaaatac
ggagaagaggagtactctggagcgaagacactggtagagcagcttccccaggacgaccca
gactatgacgtggacatgggctgtctactctacaaggagggggagtacgaggaggcttgc
aagaagttcatgtctgccatgcaggtgctgggctaccaaccagaactgtcctacaacata
ggtctgtgctactacagtatgaaacagtatggtcaggccctcaagttcatcggagagatc
atcgagagagggatcagggaacatccagagctgagcgttggcatgacgacagagggcatt
gacgtgaggagtgttgggaacaccctgatcctacatgagaccgccctcatagaaggcttc
aacctcaaggctgctatagaataccagctaaaaaactgcgatgcagctcaggaggccttg
actgacatgcctcccagatcagaggaggagctggacccagtgacgctccacaaccaggcc
ctgatgaacatggataagaagccatcggagggttttgagaaactggccttcctcctgcag
cagatccccttccccccggtcaccttcggaaacctgctgctactatactgcaaatatgag
tattttgatctggctgctgatgtgatggcagagaatgcacacctcacctacaagttcctc
accccgtatctgtatgagtttctggacgccatgttgacctgccagacagctccagaggag
gccttcaggaagtttgatgagatgaacgccaagttgacagatcaactacgcaagctgacc
aaacagatacaggaagccagactagcccgggataccgaagccttgaagaaaaccctccag
gactacgatgagatggtggagaagtacatcccagttctgatggcccaggctaagatctac
tggaacagggagaactaccagatggttgagaagatcttccgtaaatcggtggagttctgc
aacgaacacgacacctggaagctcaacgtggctcacgttctcttcatgcaggagaacaag
tacaaggaagccatcggcttttacgaacccatcgttaagaaacactacgacaacatcctg
aatgtcagtgctgttgtgctggctaacctgtgtgtctcctatatcatgaccagccagaac
gaagaggctgaagaactgatgaggaagatcgagaaggaggaagagcagatctcctacgac
gaccccgataagaaagtcttccacctctgtatcgtcaacctggtgatagggaccctgtac
tgtgccaaggggaactacgacttcggcatcacccgtgtcatcaagagtctggaaccgtac
aacaagaagctgggaacagacacctggttctatgctaagcgctgtttcctgtctctgctg
gagaacacggccaaacacatgatcatgatcagggactcagttgttcaggagtgtattcag
ttcctggagcactgtgaagtgtacggtaagacagagccagccatgatagaacagccactg
gaggaggacaggatgcacatcggaaagaacactgtcacctacgagtctcgcctcctcaaa
gctctcttctacgaggtcatcggatggaaccagtga
DBGET
integrated database retrieval system
