KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422618
Entry
139422618         CDS       T10872                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
  KO
K05209  glutamate receptor ionotropic, NMDA 2A
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020  Calcium signaling pathway
ocla04080  Neuroactive ligand-receptor interaction
ocla04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    139422618
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    139422618
   04082 Neuroactive ligand signaling
    139422618
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ocla04040]
    139422618
Ion channels [BR:ocla04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   139422618
SSDB
Motif
Pfam: NMDAR2_C Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 139422618
NCBI-ProteinID: XP_071029864
LinkDB
Position
12:97552387..97637492
AA seq 1358 aa
MLSIMEEYDWHIFSIVTSKFPGYQEFINVLKSTVDNSFVGWDLQHIITLDAVEEDSKSQI
MLKKVQSPVVLLYCSKDEGVFILEEARSLGLTGFGYIWIVSSLTSGTTETVPEEFPSGMV
SVSSEDWDYPLEARVRDGLGIITSAASAMLEEYGEIPEARTSCYGTQPEKPSKVPPLALH
KYMKNVTWEGRDLSFTEDGYQQNPKLVVIVLNKEREWEKMGRLDNRSLTLKYHVWPRFNS
FGDAETDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKC
CKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTIN
EERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSATVWIMMFVMLLLVTAMAVFM
FEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWA
FFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIR
KNYPNMHEYLSKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTIGSGYI
FATTGYGIALHKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHHEKNEVMSSQLDID
NMAGVFYMLATAMGLSLITFISEHLFYWRLRYCFTGVCTGTPGLLFSISRGIWSCIHGVH
IDMKKKSELDFSPQANMLKLIKSAKQMTNMSNLSTSRINSPKRAAEFMHSAGPMIMDMMA
EKGNFIYADNRSYAPKEVIYGDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNESNPNSV
EVAVSADAAQTNAKPRGLWKKSVDTMRQGPGVPGPDMLSPDPRISMKTQRYLPEEAAHSD
ISDCSSRGGGGSYQDPENNKHLKNKDGLKKRQLPSKYPRDCSEVELSYLKTKQGSGGGGG
VGGQGQGQIYTIDSDRELNLDSDPLHYRESRGLAADDLDYPEIYSDHNDNYRKCQDQPII
HLNSSPLHHADVDLLPDSTYSKHYGVKDKSLSLSPHETNDRSKQTHCRSCLFKFPASSSY
TPGHYTPTNTASVAAAAAAAAARSPYNRCEACLHTANLYDISEDQLLQDALLTNQGMHQH
QDEMFGHYWPQTDGPHVQKRNRLRMSRQHSFDNIMLEKPKEIDLGRPARSVSLKEKDRCF
LDDSPYANLFSVRQADKLLGSRSMLFNLEENKRSKSLYPEHGSDNPFMASSLRDDTRLVH
GRSSSDIYKQLGGGGGGGLKTSQRNENNLRSSVKSAASYCSRDGGRIPANDMYITEHVMP
YVANKTSSYSAAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgttgagcatcatggaggagtacgactggcacatcttttccatagtcacctccaagttc
cccggataccaggagtttatcaacgtcctcaagagcaccgtggacaacagttttgtaggc
tgggacctgcagcacatcataacattagatgctgtggaggaagacagtaagagtcaaatc
atgttgaagaaggtccaatccccggtggttctgttgtactgctctaaagacgagggagtc
tttatcctggaggaggctcgctccctgggcctcaccgggttcggatacatctggatcgtc
tccagcctgacctccggcaccaccgagacggtacccgaggagttcccctcgggcatggtg
tccgtctcctctgaggactgggactaccctctggaggcgcgggtgagggacgggctgggc
atcatcacgtccgctgcctccgccatgctggaggagtacggcgaaatacctgaagcgagg
acttcctgttacgggacacagccggagaagccttccaaggttcctcctctcgctctgcac
aagtatatgaagaatgtaacatgggaaggtagagacttgtcgtttacagaagatggttac
cagcagaaccccaagctggtcgtcatcgttctcaataaggaacgagaatgggagaagatg
ggtcgtttggacaaccgtagcctgacgttgaagtaccacgtgtggccgcgcttcaactcg
ttcggcgacgcggagacggatgacaaccatctgtccatcgtgactctggaggagaaaccc
ttcgtcatcgtcgaagacgtggagaggctcactggaacctgtatgaggaattctgttccc
tgtaggaagcacatcaaggacaacaccacagaggcgggcgggacctacattaaaaagtgc
tgtaaaggattctgcatcgacatcctgaagaagatcgcgaagtacgtgaagttcacctac
gatctctacctggttaccaacggtaaacatgggaagaagatcaacaacgtgtggaacggg
atggtgggagaggtggtctataagaaagctgtcatggccgtcggctctctgacgatcaat
gaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaactggaataagcgtc
atggtctcccgtagcaacggaaccgtctccccgtccgccttccttgagccattcagtgcg
acggtgtggatcatgatgtttgtgatgctgttgttggtaacagcgatggctgtgttcatg
tttgaatacatcagccctctgggctttaacaggaacctggcacaggggagagacccccac
ggcccatcgttcactatgggtaaggcggtgtggctgctgtggggtctggtgttcaacaac
tccgtcccggttcagaaccctaaaggcaccaccagtaagttcatagtgtcggtgtgggcc
ttcttcgccgtcatcttcctggcctcctacacagccaacctggctgccttcatgatccag
gaggagtttgtagaccaggtcacgggactgtctgacaacaagttccagaacccgtatgcg
tactcccctccgttccgttttgggacggtccccaacggttcgacggagaggaacatcagg
aagaattaccctaacatgcacgagtacctgtccaagtaccaccagacaggggttcaggac
gctctggtcagcctgaagacgggtaaactggatgccttcatctacgatgctgctgtgttg
aactatgcagcgggtcgagacgagggctgtaagctggtcaccatcggcagcgggtacatc
ttcgccaccaccggctacggcatcgctctgcataaagggtcctactggaaacgccaggtg
gacctggctatactggctattataggagacggtgagatggaggagctggaagctcagtgg
ctaacggggatctgtcaccatgagaagaacgaggtgatgtccagtcagctggacatcgac
aacatggccggagtgttttacatgctggctaccgcaatgggactgtctctcattaccttc
atatcagagcatctcttctactggaggttgagatactgtttcactggagtctgtacggga
acaccaggactactgttctctataagcagggggatttggagttgtatccacggcgtccac
atcgacatgaagaagaagtccgagctggattttagccctcaggctaacatgttgaagctc
atcaagtcagccaaacagatgaccaacatgtccaacctgtctacgtccaggatcaattcc
cccaaacgggcggctgagttcatgcactcggcggggcccatgatcatggatatgatggct
gagaaaggtaacttcatctacgccgacaatcgaagctacgcccctaaagaggtgatctac
ggcgatacgggcgacctccaggcgtacctggccaaccgacacaaagaccacctgaacaac
tacatcttccaaggcggacagcaccctctgaccctcaacgagtcaaacccaaactccgtg
gaagtggcggtgagcgcggacgccgcccagaccaacgccaaacccagaggcctgtggaag
aagtccgtggacacaatgcggcagggtccaggtgtccccggccccgacatgctgtccccc
gaccctcgcatctccatgaagacacagcgataccttccggaggaagcagctcactcagac
atctctgactgctccagccgaggaggaggcggttcgtaccaggacccggaaaacaacaag
cacctgaagaacaaggacggattaaaaaaaagacagttgccgtcgaaataccctagggac
tgcagcgaagtagagctgtcctacttaaagactaagcagggcagcggagggggtggagga
gtgggaggacagggacaaggacagatctacaccatagactcagatagagaactcaatctc
gactccgatcctttacactaccgcgagagtcgaggcctggccgccgacgacctggactac
ccggagatctactctgaccacaacgacaactacaggaagtgtcaggatcagccaatcatc
cacctcaactcgtccccgctgcaccacgccgacgtcgacctgctcccggactccacttac
tccaaacactacggcgtgaaggataagagcttgtccctgtcgccccacgagaccaacgac
cgttccaaacagacccactgccgctcctgtctgttcaagttccctgccagtagcagctac
accccgggtcactacacgcccacaaacaccgcttctgtcgccgccgccgccgcagccgcc
gccgcccgctcgccctacaaccgttgcgaagcgtgcctccacactgctaacctctacgac
atcagcgaagaccagctgctccaggacgccctgctgaccaaccagggaatgcatcaacat
caggacgagatgttcggccactactggcctcagacggacggtccgcacgtccagaagaga
aatcgtctgcgtatgtcccgccaacactcgttcgacaacatcatgctggagaagcctaaa
gaaatagatctggggcgtccggctcgctccgtcagcctcaaagagaaagaccgctgcttc
ctggacgattctccctacgccaacctgttcagcgtccgccaggccgacaagctgttgggc
tccaggtcgatgctgttcaacctggaggagaacaaacggagcaagtcgctgtaccctgaa
cacggctctgacaaccccttcatggcgtcttcgctgagggacgacacgcgcctcgtccac
ggacgcagctcctccgacatttacaaacagctgggaggaggaggaggaggagggctcaaa
acatcgcaacgcaacgaaaacaatctgagatcctcggtcaaatccgccgcttcctactgc
tcccgggacggaggacggatacccgccaatgacatgtacattacagagcatgtgatgcct
tatgtagccaataagacaagttcttactcagccgcaccgcgaggggtactaaactcagcc
cagttcagcaatagacgggtttataagaagatacccagtctggagtcagacgtttaa

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