KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422686
Entry
139422686         CDS       T10872                                 
Name
(RefSeq) AF4/FMR2 family member 1-like isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139422686
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     139422686
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 139422686
NCBI-ProteinID: XP_071029989
LinkDB
Position
12:complement(9278961..9351289)
AA seq 1161 aa
MAARSSYNEERNLLRIQERERRNQGTFQEKEFYQETVPLFGEPYKTNKGDELSSRIQRML
GSYEDVNNPNTHQCLDSSFSKEPQSHVTTKYGRPSRSRDRAKPPFQNPPQYGASQSQSGG
PPRGSHSGQPLKKIHGPSSSYTQSSLGLSQGQACPDPHQRKTELWPDLRECASLPPVLSA
LSPPADPLSPLHSSDPSDSEHQDSPLHPERHPASPLHPDSHFPMVSPLDDPQRDVPPPAI
DGATLPSQTFPPPLASKPNLVMPQKPTAYVRPMDGQDQVTSESPDLKPSPEDFHGQSYHE
PLPDLKSTRPSLSKLKIPSQSIETLSHEADCVEDILREMTHSWPPLLTAIQTPSTVEPSK
FSFPVKEAQHVPPASPGQKHYGSPPLAPPSICQQSSCTVTAAHSSGVESASSSDSESSSG
SESGSESSESGTEAPPQPLRSSSPPVTKAEGPVVTNWQLNNWIRVSQQNPSTESQSDALL
SPLPKQQQSHEEEAIPPRDYKSNTPPRRSEFSDGEAKPQRSEEAAHNQHVQHKSPATSHV
GNSSNSSSQRKTVGNKHPSRPAKAPRPEDPQAGLQVESVEVVPRDKDTSFTDRPKVKTKT
GHSNSKSSGAKTNSRKPAKRGTSEKKTEQPASQGGPKVTLVLDCKREKSPSPSPAQEVDQ
PAPAVVKTISVRTETLPAPQKGQKKPRRHSLDPAHKAKRESSAKASRVCQGPPRALLVKI
ELSLLSRVPTQGSRPSSGGQEPAIRKGPTTAPERGDTNPAAPIPTKVCKKRPAEKDVKTV
PRKKPKLQKDLKPSTSGPGSRKSETERKRSKGAPVPLLQPTTTQDPGKGQGGHKRHTLDA
PEPSTASAAHRRDREASTPVKHKKSTGKQRTEHAKKGLKSSVAFSVPSQPTGAALSSRPL
LQFEERQQPVEYHMKEAKTLKHKADATPDKVGKAFNYLDAAMSFVESGIAMETDPQTPKS
AYTMFAETLDLIKFILKLKGSVNPSAPATDKDFTVLCMRGLSLLQMAMFRYKREAALKYS
RTLTDHFKSSIKSVTQAPSPCVSKSTGTPSPMSPMPSPASTASSGPGSNHSSGAGSGTVS
TVAIPQVIQQVASSYVNITALFLSAHDIWEQADELAHKGSGLLSELDLALGPLSLTSTMS
SLVRHTRQGLQWLRLDTREAQ
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggcagctcgttcaagctacaatgaggagaggaacctccttcgcatccaagagcgggag
cggcggaatcagggaaccttccaggaaaaggagttctaccaggagaccgttcccctgttc
ggggaaccctataagacgaacaaaggagatgagctgtccagccgtatccagaggatgctg
ggtagttatgaggatgtgaacaatcccaacactcaccagtgtttggacagcagcttctct
aaggagcctcaatctcatgtcaccacaaagtatgggcggccatctcgcagccgagaccga
gcgaagcctccattccagaaccctcctcagtacggggcaagccagagccagagtggtggt
ccgccccgtggtagccactctggccagcctctgaagaagatccacggtccttcctcctcc
tacacccagtcctccctgggtctcagccagggccaggcctgcccagacccacaccagaga
aagactgagctctggccagacctgagggagtgtgccagtcttcctccagtcctctccgcc
ctgtcccccccagccgatcccctatcccccctacattccagtgaccccagcgactctgaa
caccaggactcccccctgcaccctgagaggcacccggcctctcccctacaccccgactca
cacttccccatggtgtcccccctggatgacccccagagagacgtcccgcctccggccatc
gatggggcaaccctaccctctcagaccttccctccaccactggcctccaaacccaacctg
gtcatgccccagaagccaacagcctacgtccggcccatggacggccaagaccaggtgacc
agcgagtctccggacctcaagccctctccagaagacttccatgggcagtcttatcatgaa
cccttaccagacttaaaaagcaccaggcccagcctttccaaactgaagataccatcacag
tctatagagacgctgtcacatgaagctgactgtgtggaagacattctgagggaaatgacc
cactcctggcctcctctcctgactgccatccagacgcccagcacagttgagccctccaag
ttctccttcccagtcaaggaagcacagcatgtcccacctgcgtctccaggacaaaaacac
tatggatcacctccactagccccgccctccatctgtcaacagagctcatgtacggttaca
gcagcacattccagtggggtggagtcagccagctccagtgactcagagagcagctcaggg
tcggagtcaggcagtgagagcagtgagagtgggacagaggcccccccacagcccctcagg
agtagtagcccacctgtgacgaaggcggagggccccgtggtgactaactggcagttgaac
aactggatcagagtgagccagcagaaccccagcacagagagccagagtgacgctctactg
agccctctacccaaacagcagcagagccatgaggaggaggccattcctcccagggactac
aaatccaacacacccccacgtcgctcagagttcagtgacggcgaagccaaacctcaacgc
agtgaagaagctgcccacaaccagcatgtccaacacaagtccccggccacctcgcacgtt
gggaacagcagcaacagcagcagccagagaaagacagtggggaacaaacacccctccaga
ccagccaaggctccccgacctgaagaccctcaggctgggttacaggtggagagtgtggag
gtggtcccccgtgacaaagacacctcgttcacagacaggccaaaggtcaaaacgaaaacc
ggccacagcaatagcaagagcagcggagccaaaacaaacagcaggaagcctgccaagcgt
ggcacctctgagaagaagaccgaacaaccagcgtcacagggtggccccaaggtcactctg
gtgctggactgtaagcgggagaagtctcctagtcccagtcctgcccaggaggtagaccag
ccagccccagctgtggtgaagaccatcagtgtcaggacagagaccctcccggcccctcag
aagggccaaaagaagccccggcgccactctctagacccagcacacaaggccaagcgggag
tcctcagccaaagcttccagggtctgccaaggtcctccacgggccctgctggtaaagata
gaattgagcctgctttccagggttcccacccagggttccaggccttcttcagggggccag
gagccagccatcaggaagggacccaccacagccccagagaggggggacaccaaccccgct
gcccccatccctaccaaagtctgcaagaagagaccggctgagaaggatgtgaaaaccgtg
ccaaggaagaagccaaagctgcagaaagatcttaaaccctccacttcaggtcctggttcc
cgcaagtctgagactgagaggaagcggtctaagggggctcctgttcctctgctgcagccc
accaccactcaggaccctgggaaagggcaggggggccacaaacggcatacgttggatgcc
ccagagcctagcacagcatctgcagcccaccgcagggacagggaggcctccacacctgtc
aagcacaagaagagcactggaaaacaacgcacagagcatgccaagaaaggcctcaagagc
agcgttgccttctccgtgccttcccagcccaccggggccgccctgtcctccagacccctg
ctccagttcgaagagcggcagcagccagtggagtatcacatgaaggaagccaaaacactc
aagcacaaggcagatgccacgccggataaggtgggcaaagctttcaactacctagatgct
gccatgtccttcgtggagagcggcatcgctatggaaaccgatccccagaccccgaagtcg
gcgtatacgatgttcgctgaaaccttggatctgatcaagttcatactgaaactaaagggc
tctgtgaacccctcggctcctgctacagacaaggactttacagttttatgcatgaggggc
ctgtcccttctccagatggccatgtttcgctacaaacgagaagcagcgcttaagtattca
aggaccctgacagatcatttcaagagctctataaagtctgtaacccaggctccttcacca
tgtgtctcaaaaagcacaggtaccccatcccccatgtctcccatgccgtctcctgccagc
acagccagttctgggccgggctccaaccacagcagcggggcggggtcaggcaccgtcagc
accgtggccattccacaggtcatccagcaggtggcgtcttcctacgtcaacatcacggca
ctcttcctgagtgctcacgacatctgggagcaggctgacgagctggcccacaaaggcagt
ggtttgctgtctgagttggacttggctctgggcccgttgagcctgacgtccaccatgagc
tctttggtgcgtcacacacggcagggactgcagtggctccgactggacactcgtgaggca
cagtga

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