Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422696
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Entry
139422696 CDS
T10872
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139422696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139422696
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ocla04091
]
139422696
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
139422696
Lectins [BR:
ocla04091
]
L-type lectins
139422696
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GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
GCN5L1
Motif
Other DBs
NCBI-GeneID:
139422696
NCBI-ProteinID:
XP_071030020
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Position
12:10662892..10691343
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AA seq
521 aa
AA seq
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MLRQQWYQKMAVSIVNGLAAEACLLIFTLICQHSNANNIAAAASTAEAPNRRFEYKYSFK
GPHLSQADGSIPFWVHSGNAIPSADQVRITPSLRSQKGSVWTKSTVNFDNWEAEVTFRVS
GRGRMGADGLAIWFTTAQGLDGPVYGAADNWNGIGIFFDSFDNDGKKNNPAVLVVGNNGK
LVYDHPNDGTTQALGTCLRDFRNKPYPVRAKITYYKRTLTVLINNGFTPDKDDYEFCTKV
DNMVIPQEGYFGISAATGGLADDHDVLSFLTFRLSEPGQELPPPEAEMPKQDKDKYQEEF
ENFQQDLDKKKEDYQKEHPDVQGQPIEDMYESVNDREIRQVFEGQNRIHLEIKQLHHQLA
VILDEQRRYVSVATDEISKRQGESGGQVGQAPSQEMGAVVATQQEVLRNLNELRNSFYES
LKQIGASQHQGNAVGMGTYETVQHFNDIKEHLHVVKKNIEHLITRTGNPSEKQVMNCPDP
PPMPSCLGTTHFLVFVVIQSVLFFSYIMYKSQQEAAAKKFF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctacgtcagcagtggtaccaaaagatggcagtgtccatagtaaacggcctggctgct
gaagcgtgtttattaatatttactttaatatgtcaacacagtaatgccaataatatcgcc
gccgctgcatcgactgcagaagccccaaaccgcaggtttgaatacaagtacagtttcaag
ggaccgcacctgtctcaagccgacgggagtattcccttttgggtacacagtggaaatgcc
atccccagtgccgatcaggtccgtatcaccccctctctcaggagtcagaagggctcggtc
tggaccaagtccacggtcaactttgacaactgggaagcagaggtgacattccgtgtgtct
ggacgagggaggatgggagcggacggcctggcgatatggttcactactgcacaaggcctg
gatggtcctgtctatggagccgctgacaactggaacggtatcggcatcttcttcgattcc
ttcgacaacgatgggaagaaaaataaccctgctgtgctggtagtgggaaacaatggcaaa
cttgtttatgatcacccaaatgatggcacgactcaggccctggggacatgcttaagagac
ttccgtaacaaaccctatcctgtcagagccaaaataacatactataaaagaacactaaca
gtgctgatcaacaatggtttcacgccagataaggatgactatgagttctgtacaaaagtg
gacaacatggtcattccacaggagggctacttcggcatctcggctgccactggtggtcta
gcagacgatcatgatgtcctgtccttcttgacgttcagactatcagagcctggccaagaa
ctgcccccacctgaagcggagatgcccaagcaggacaaggacaagtaccaggaggaattt
gagaactttcagcaggatctggacaaaaaaaaagaggactaccagaaggagcatccggac
gttcagggacaacccattgaggacatgtatgagagtgtgaacgacagagagatccgccaa
gtgtttgagggccagaaccggatccatctggagatcaagcagcttcaccatcagctggcc
gtgatcctggacgaacagcgacgctacgtatccgtggctaccgacgagatctccaagcgc
caaggggagtctggaggacaggtgggacaggctccgagtcaagagatgggtgcagtggtt
gcaacacaacaggaagtactgaggaacctgaacgagttgagaaactcgttctatgagtct
ctgaagcagattggtgccagccagcatcagggcaacgcagttggcatgggaacgtatgag
acggtgcaacacttcaacgacatcaaggaacatctacacgtggtcaagaagaacatcgaa
cacctcatcacgcgcactgggaaccccagtgaaaagcaggtgatgaactgccctgatccc
cctccaatgccttcctgtttgggtaccacacacttcctggtctttgtggtcatccaatca
gtcctgttcttcagctacattatgtacaaaagtcaacaagaagcagcagcaaagaaattc
ttttga
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