Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422716
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Entry
139422716 CDS
T10872
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03420
Nucleotide excision repair
ocla04141
Protein processing in endoplasmic reticulum
Brite
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
139422716
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
139422716
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NCBI-GeneID:
139422716
NCBI-ProteinID:
XP_071030122
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Position
12:complement(12396023..12415055)
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AA seq
376 aa
AA seq
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MQITLKTLQQQTFKIDIDEEETVKTLKERIENEKGNDGFPVAGQKLIYAGKILNDDTAIK
DYKIDEKNFVVVMVAKPKAAPAAAQPSGSAATTSSSTTAPTVPTAASPGSDNPPEGSKPA
EERPCSTSAPASTPTSSSGLLTNVNMFEEATSALVTGQSYENMVTEMMLMGYEREQVVAA
LRASFNNPDRAVEYLLTGIPAGEESHAGADPVVPSVGGGTPALNTGSMTTPASVATGANP
LGFLVNQPQFLQMRRIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFIQMLNEPAQEG
GQGGGGGGGGGGGVGVGGEAGSGMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKN
ENLAANFLLQQNFDDD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactttgaaaaccctccagcagcagacatttaaaatcgacatagacgaagag
gagacggtaaaaaccttaaaggaaagaattgagaatgagaagggaaacgatggttttccg
gttgcagggcagaaattgatatatgcagggaaaatcctaaatgatgacactgctatcaag
gactataagattgatgagaagaactttgtggttgtcatggtggcaaagcctaaagcagcc
ccagcagctgcccagccttccggttctgccgccaccacctcctccagcactacagccccc
actgtacccacggctgcctcgccaggctcagataacccaccagaggggtccaaaccagcc
gaggagaggccctgcagcacttcagcaccagcatcaacccccaccagttcctctggtcta
ttgacaaatgtgaacatgttcgaggaggcaacttctgctctggtgacaggccaatcgtat
gagaacatggtgacagagatgatgctgatgggctacgagagggagcaggtagtggcagcg
ctcagagccagcttcaataacccagacagagctgtggagtacctgcttacagggatccca
gctggggaggagagccatgcgggtgctgacccagtggtgccctctgtgggtggaggaact
ccagctctcaacacaggcagtatgacgacccccgccagcgttgcaacaggagccaatcct
ctggggttcctggttaaccagcctcagttcctccagatgagacggatcatccagcagaac
ccctctctgctccctgccttactacagcagatagggagggagaacccccagcttctgcaa
caaatcagcagccaccaagagcagtttatccagatgctgaacgagccagcccaggagggg
ggacagggaggaggaggaggaggaggaggtggtggtggagtgggggttggtggggaggct
ggaagtggcatgaactacatccaggtcacaccccaggagaaggaggccattgagcggcta
aaagccctaggattcccagaaggacttgttatacaggcctactttgcctgtgagaagaac
gagaacttggctgctaacttccttttacaacagaactttgacgacgactag
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