Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422722
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Entry
139422722 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139422722
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139422722
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139422722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
zf-C3HC4_2
zf-RING_10
zf-RING_2
Prok-RING_4
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
139422722
NCBI-ProteinID:
XP_071030130
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All DBs
Position
12:complement(12863645..12905640)
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AA seq
942 aa
AA seq
DB search
MWIQIRTIDGKETRTIEDLSRLTKIESLRLKIQDIFNVNPGQQRLFYRGKQMEDGHTLYD
YNVGLNDIVQLLIRSQAGDAPDSPLVISPVVSPKECDTTPPTTPNTTTGAATTASKPTTV
APTHTPKPTTVNNNTTTTGDTSTTTNISTTTSKNTSITSDPNNNGDKSSSGPSAPLEKHD
NQPSTSTRPFLIDAGIGVFKINELVDCRDISIGAWFEACIDNVSLSPKGQNSTSKAPTAG
KVGRPSKRTNGKLEPGQGQSHLSSSDNNNNNNGNNSTSVLNSDSIGPGAGPSTSQTDYTA
TDKEKEDVTYHIRYDDYPENGVVEMCGGNVRPRARTLLRWDQLTVGLVVMVNYNIEIPEE
RGFWFDAEITALNEISRTNKEVRIRILLGGPGDVIPDCKLLFLDEIYQIEKTGAHSLSAV
DGQFKRKSGPECKHCKTDPESECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYCLNPPLA
TIPDDEDWYCPTCKNDTSEVVKAGEKLKASKKKAKMPSAHTESQRDWGKGMACVGRTKEC
TIVPSNHYGPVPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEV
DRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHYNRALALNCDAPINDKDGAESRNWRAG
KPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEKGKCGFLVWRYLLRRDDLEPAPW
TPEGLARIQTLGLAVQYPPGYVEAMANKTKKEANARPGSSRSKKQPGRGRPRLQPLKKKV
KEEEDEEEEEEEEKPMEGTDQSQSNGSQETEVCKESTEPRAKRQKMEEAFQLTEQQQSLI
KEDQPNRKNWDEAMGHLKEGPNFLRKVEQTFMCVCCQELAYQPITTVCTHNVCKTCLQRS
FRAEVYTCPACRHDLGKDYVMVLNKTLQLLLDQFFPGYSKGR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaaattcggaccatagacggaaaggagacacgaaccattgaggatctttcc
aggctgaccaaaattgagtctctgaggctgaaaattcaagatatcttcaatgtaaaccct
ggacaacaacggttattctatcggggcaaacagatggaagatggccacacactgtatgac
tacaacgtgggtctgaacgatatcgtccagctgcttatccgttcccaagcgggggacgct
ccagacagtcctctcgtcatctcccctgtcgtcagccccaaggagtgtgacacaacgccc
cccaccacccccaacactacgactggtgcagctaccaccgcctctaaacctaccaccgtg
gccccaacacatacccccaaacccaccacagtcaacaacaacacaaccaccactggcgac
accagtactaccaccaacatcagtacaaccaccagtaagaacacgagtatcaccagtgat
cccaataacaatggagacaagtcttcttctggtccatcggcaccactggagaagcacgac
aaccagccatcaacctctacacgtcccttcctcatagacgcgggaattggggtgttcaag
ataaacgagttggtggactgcagggacataagcattggtgcctggtttgaagcctgcatc
gacaacgtgtcactcagcccaaagggacagaacagcaccagtaaagctcctacagcaggg
aaggttggcaggcctagcaaaaggacgaacggcaagcttgagccgggccaaggccaaagc
cacctctcctcctcagacaataataataataataatgggaataattcgacttctgtgttg
aactctgacagtattgggccaggggctgggccctccacctctcaaacagactatactgcc
acagacaaagagaaggaggatgtgacgtaccacatcagatatgatgattaccctgagaac
ggcgtggtggagatgtgtggcggtaacgtgcggccgcgggctcggaccctgctccggtgg
gaccagctcacggtaggcctggttgtcatggtgaactacaacatagagatccctgaggag
aggggcttctggttcgatgctgagattacagcactcaatgagatctccaggaccaacaag
gaggtccgcatcagaatcctgctgggagggccaggggacgtcatcccagactgtaaactg
ttgtttctggatgagatctatcagattgagaagactggagcacactcgctgtctgctgta
gatggacagttcaaacgcaagagcgggccggagtgtaagcactgcaagacggaccccgag
tcggagtgcaggttctgctcgtgctgcgtgtgtggagggaagcaggatgcccatatgcag
ctgctgtgtgatgagtgtaacatggccttccatatatactgtctcaacccaccgctagcc
accatacctgacgacgaggactggtactgtcccacctgtaagaacgacaccagtgaggtg
gttaaggccggggagaagctgaaggccagtaagaagaaagccaagatgccctcggcccat
acagagagccagagggactggggcaagggtatggcctgtgtggggcgcactaaggaatgt
accatcgtcccctccaaccattacgggcccgtacctggggttcccgtgggaacaacatgg
aagttccgcgttcaggtgagcgaggcgggagtgcacaggccccacgtgggaggtatccac
ggccgcagtaacgatggctcctattcgctggtgctggctgggggcttcgaagatgaagtg
gacaggggagatgagttcacctacacaggcagcgggggtcgcgacctttcagggaacaag
cgcattggggagcattcctttgaccagaccctgacccactacaacagggccctggcgctg
aactgtgacgccccaatcaacgacaaggatggggcggaatccaggaattggcgtgcgggg
aagccggtgagggtggtgcggagctccaagggccgacgtatcagcaagtacgctccggag
gagggcaaccgatacgatggcatctacaaggtggtgaagtactggccagagaaagggaag
tgtggtttcctggtgtggaggtacttgctgcgaagggatgacctggagcctgctccctgg
acacctgaggggctggcgcgcatccagacactgggcctggctgtgcagtatcctccaggc
tacgtggaggccatggccaacaagaccaagaaggaggctaatgctcggccagggtccagc
aggagcaagaagcaacctggacggggccggccgcggctacaacctctgaagaagaaggtg
aaggaggaggaggatgaagaagaggaagaggaggaagagaagcccatggagggtacagac
cagtcacagagtaacggcagtcaggagacagaggtgtgtaaggaatcgacagagccccga
gccaagcgtcagaagatggaggaggcgttccaactgacagagcagcagcaaagcctcata
aaggaagaccagcccaacagaaagaactgggacgaggccatgggacacctcaaggagggg
ccgaacttcctgaggaaggtggaacagacgtttatgtgtgtctgctgccaggagctagcc
taccagcccatcaccaccgtctgtacacacaacgtgtgcaagacctgtctccagcggtcg
ttccgtgctgaggtgtatacctgccctgcctgtcgccacgacctggggaaggattacgtc
atggtcctaaacaagactctacagctgctgctcgaccagttctttcctggctatagcaag
ggccgatga
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