Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422725
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Entry
139422725 CDS
T10872
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
139422725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139422725
NCBI-ProteinID:
XP_071030133
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Position
12:complement(12987062..13081887)
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AA seq
1429 aa
AA seq
DB search
MYFLTGWPRRLLCPLKSEEEPFHVQPSSQRFYFAVLSETQLSVWFSRPSVLIVSYIESAK
ASSQFGFYQQAEWKQDDSMIAVAAANGYILLFDVVGGGEDKYLYEPVYSKGSRGVKVTPG
YKEEQCAPALSLEMKRPIDLEAPITSMQSLQEDLLVSTADGYLHVLHWDGVSNGRKAISL
CSVPFSLDLQSARGGLCLDLKGVYIRDMTYCVTLDGFAVVLDDGRLGFITPLANRITADQ
LQGVWAADVTDGTCVAVNNKYRLVTFGCASGSVLVYSIDTTTGSMQLSHKLELTPKHYPD
VCNKTGAVKLIRWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPIN
ISSMCWGAEGYHLWVITSREETELVENMEEAPPQTQQAGILQFNFIKSALTVNPCTSNQE
QVLLHGEDRLYLTCGDPTQLPSGSSESPHPHNLPHGGEGSPTHHPSPNSTSQGLSTLLGY
KHWHVVQIHSTYLESNWPIRFAAIDTAGQCIAVAGRRGFAHYCMSTRKWKLFGNITQEQN
MTVTGGLVWWNGFVVVACYNFIDRQEELRLYLRSSNLDNTFSSVTKLHSDTLLLNVFRDM
IILFRADCSICLYSMERRHDGPNPSASVELLQEVSMSRYIPHPALVVSVTLTSVRTETGI
TLKAPQQTCMADSIILNLAGQLIMLQRDRSGPQLQEKLPFCPPVVLAQYVENVWTTCRSN
RKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLFEDAL
VLGASNETVVYDSLQGPREGRESLEGLFPYCTVERTSQIYLHHILRQLLVRNLGEQALLL
AQSCAALPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTIVHCARK
TEFALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLFNTAL
EQGKWDLCRHMIRFLKAIGSGEMETPPPTPTTQEPSSTGGFEFFRNRSISLSQSADSIAA
GKFNLQKTFSMPSGPSAKGSERWSKDSDCAENMYIDMMLRRHARHLLEHVRLKELGCFSA
QLGFELIGWLCHERTRVARVDDFVMALKCLHKDFLWPFPVTPAGSISSPLKNGHRRTVLS
QHLLKSQSADSLLNSDMDTAPPQAAARNSNHTWLDGLGALGPTEPTEMDTALSHGGPQTQ
EAFLSPLTNKTEECSIGSATDLTETSSMVDGDWTMVDENFSALSLTHSELEHISMELANK
GPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILREATVIKQVVNFLDSPEVPHETVQSVRS
GLLGVDAWASTDCLGYKPFLNMIQPQLQKLIETSVEQIQPEAFLPGASNSKLSEPQPGGP
SAEDSRGPALLGLALPLEPSGGLGTEDGGVPEEQEEQAVDEGVYDCTLS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaactggctggcctcggaggctactttgtccactgaaaagtgaagaagaa
ccgtttcatgttcaacccagctcccagaggttttacttcgctgtattgtccgagactcaa
ctaagcgtctggtttagtcggcccagtgttctgatagtgagctacatagagtcggcgaaa
gcatcatcgcagtttggcttctatcagcaggccgaatggaagcaggacgattccatgata
gcagtagcggctgccaatggctacatcctcctgtttgacgtagtgggaggaggagaggac
aagtatctttatgaacccgtctattccaaagggagtcgtggtgttaaggtcaccccaggt
tataaagaggagcagtgtgcccccgctctcagcctggagatgaagagacccatagacctg
gaggctcccattaccagcatgcagtctcttcaggaggatctattggtgtctactgctgat
ggctacctccacgtcctccactgggatggagtcagcaacggcaggaaggccatcagtctc
tgtagtgtccctttctccctggacctacagtctgccagaggtggtctgtgtctggacctg
aagggggtgtacatcagagacatgacctactgtgtgacactggatggctttgctgtggtg
cttgatgatggcaggctggggttcatcactcctctagccaacaggatcactgcagatcag
ctgcagggcgtctgggcagcagatgtaacagacggcacgtgtgtggctgtcaacaataag
tacagactggtgacctttggctgtgccagtggctcagtgttagtgtacagtatcgatacc
actacagggtccatgcagctctcccacaagctggagctcactcctaaacactaccccgac
gtgtgtaacaagacaggcgcggtgaagctgatccgctggtcccccgactacagtgttgcc
atggtgacctgggagtgcgggggactgtctctgtggagtgtgttcggagcccacctcatc
tgtaccctgggggaggactttgcgtatcggtcagacggcactaaaaaggaccctataaat
atcagctcaatgtgctggggagcagagggctaccacctgtgggtcatcaccagcagagag
gagacggagctggtagagaacatggaggaggctcctccccagacccagcaggctggcata
ctgcagttcaacttcatcaagagcgccctcacggtcaacccctgcacgagtaaccaggag
caggtgttacttcacggggaggaccgtctctacctaacctgtggtgaccccacccagctc
ccctccggcagctcagagagcccccacccccataacctcccccacggcggggagggcagc
cccacccaccacccctcgcccaactctacctctcagggactcagcactttactgggatac
aagcactggcacgtggtccagattcacagcacatacctagagagcaactggcctatacgg
tttgcagccatagacacagcaggccagtgtatagctgtagcagggagacgtggctttgca
cattactgcatgtccaccaggaaatggaagctgtttgggaacatcactcaggagcagaac
atgaccgtgacaggagggctggtctggtggaacggctttgtcgttgttgcctgttacaat
ttcatcgaccggcaagaagagctgcgtctgtacctgcggtcgtctaacctggataacacc
ttctcttccgtcaccaagctgcactctgacactctgctgctcaacgtgttcagagacatg
atcatcctcttcagagcagactgctccatctgcctctacagcatggagaggagacacgac
gggcccaatccatcagccagtgttgagctgcttcaggaggtgtccatgtctcgctacatt
cctcatccggccctggtggtgtcggtcaccctcacctccgtacgcacagagaccggcatc
acgctcaaagccccacagcagacctgtatggcagacagcatcatactgaacctggcaggc
cagctcatcatgctacagagagaccgttctggaccccagctacaggagaagctgccgttc
tgtcccccagtggttctggcccagtatgtagagaatgtgtggacgacgtgtcgtagtaac
aggaagaagcgccacctactggaggctctgtggctgtcgtgtggagaggctgggatgaag
gtgtggctccccctgttccctcgtgaccatcgtaagccccactccttcctgtcccgccgc
atcatgctgcccttccacatcaacatctaccccctggctgtgctgtttgaagatgctctg
gttctgggagcttccaacgagactgtggtctatgacagcctgcagggtcctagagagggc
cgggagtccctagaggggttgttcccttactgcacggtggagaggacttcccagatctac
ctccaccacatcctgaggcaactcctggtccgtaacctgggggagcaggcccttctcctg
gcccagtcctgcgcagcgctcccctacttcccccacgtcatggagctcatggtccacgtg
gtgctggaggaggaggccacctcccgggagcccatccctgacccgctgctacccaccgtg
gccaagttcatcacagagttccccctgttcctccagaccatcgtgcactgcgccaggaag
acagagtttgccctgtggaactacctgtttgctgccgtgggcaaccccaaggatctgttt
gaggaatgtctgatggcccaggacctggacaccgctgcatcctatctcattatactacag
aacatggaggttccagcagtgagcaggcaacacgctacgctactcttcaacacggctctg
gagcagggcaagtgggacctctgtcgtcacatgatccgattcctcaaggccattggctct
ggagagatggagaccccacccccaacaccaaccactcaggaacccagttcgacgggaggt
tttgagttcttcaggaatcgcagcatcagtctgtctcagtcagctgacagcatcgctgct
gggaagtttaacctacagaagaccttcagcatgccctctgggccctctgctaaggggtct
gagaggtggtctaaggacagtgactgtgcagagaacatgtacatagacatgatgttgagg
cgtcatgcccgccacctccttgagcacgtcagactaaaagagctgggttgtttctctgcc
cagctgggcttcgagctgattggctggctgtgccacgagcgcacgcgggtggcgcgggtt
gatgattttgtcatggcgctgaagtgtctccacaaggacttcctgtggccgtttcctgtc
accccagccggctccatcagctcgcctttgaagaacggacaccgcaggacagtgctgagc
cagcatctactgaagtcccagtcagcagacagcctgttgaacagtgacatggacacagcg
cccccacaggccgcagcacgcaacagcaaccacacttggctagacgggctgggggctctt
ggacctacagagcctacagagatggacactgccttgtcccacggggggccacagacacag
gaggcctttctctctccactaaccaacaaaacggaggagtgcagtatcggttctgccaca
gacctgacagagaccagcagtatggtggatggagactggaccatggtggatgagaacttc
tctgctctcagtctgacccactctgagctggaacacatctccatggagctggctaacaag
ggaccacacaagtcccaggtccagctacggtacctcctgcatgtgttcatggaggctggc
tgtctggagtggtgtgttgtgattggtctgatcctgagagaggccacagtcattaagcag
gtggtcaacttcctggacagccccgaggttcctcatgagaccgtccagagtgtccgctcc
ggcctgctaggggtcgacgcatgggcctccactgactgcctgggctataagcccttcctg
aacatgatccagccccagctacagaagctcatagaaacttctgtagagcagatccagcct
gaagccttcctgccaggggcttccaactcgaagctgtctgagccccagcccggaggcccc
agtgcggaagatagtagggggcctgctctcctgggtctggcccttcctttggagccctct
ggggggttagggacagaggacggcggagttccagaggagcaggaggaacaggcggtggac
gagggggtgtacgactgcactctgtcctga
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