Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422734
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Entry
139422734 CDS
T10872
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00310
Lysine degradation
ocla00514
Other types of O-glycan biosynthesis
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
139422734
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139422734
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139422734
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
139422734
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
O-linked Gal type
139422734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
139422734
NCBI-ProteinID:
XP_071030145
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All DBs
Position
12:complement(13770118..13782670)
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AA seq
590 aa
AA seq
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MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccttactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaacttaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtacgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcctactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggccttccaccctcctcacctggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcagctttagtcatctcatcctggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagcctcttccccaaacagagagacctcatgggc
ttcgatgaggtgtacctgattaacctgcgtcgtcgtcaggaccgtagagacaggatgctg
tattctctcaatgagctggagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgaccaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtcgaccagcagatggacaaggcgctgatcttcgaggatgacgtgcgt
ttccaggccaacttcaagcggcgcgtactgcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggtgcccagaaactgctcaacgctgaacccctctccaagatgctgccc
gtcgacgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tacgccggggaccccaagtgggtgagcgacacagagacctcaacgctgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaaaacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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