Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422838
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Entry
139422838 CDS
T10872
Name
(RefSeq) exportin-7-like isoform X1
KO
K18460
exportin-7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139422838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139422838
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139422838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Motif
Other DBs
NCBI-GeneID:
139422838
NCBI-ProteinID:
XP_071030339
LinkDB
All DBs
Position
12:18899558..18923447
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AA seq
1100 aa
AA seq
DB search
MGVREEHEWSKMADHVQSLAQLEILCKQLYETTETGVRLQAEKALVEFTNSPDCLSKCQL
LLERGSSSYSQLLAATCLSKLVSRTNNPLPLEQRIDIRNYVLNYLATRPKLAEFVTQALI
QLYSRITKLGWFDCQKDDYVFRNVIADVTRFLQQDSVEHCIIGVTILSQLTNEINQADTS
HPLTKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDESQHGLLMQLLKLSHNCLN
YDFIGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSLSPLVLSCLVQIA
SVRRSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVK
VENYPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHLLETYTPE
VTKAYITSRLESVCIILRDGLEDPLDDAGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQS
AQTYQELLQSTNSSTIDITVQEGRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVL
QLMNLTDSRLAQAGNERLELAMLSFFEQFRKIYIGDQVQKSSKLYRRLSEVLGLNDETMV
LSIFIGKIITNLKYWGQCEPITSKTLQLLNDLSIGYSSVRKLVKLSAVQFMLNNHTSEHF
SFLGVNNQSNLSDMRCRTTFYTALGRLLMVDLGEDEDQFEQFMLPLTAAFEAVAQMFSTN
TFNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFDWIYPAYMPILQRAIELWYHVPACT
TPVLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITTYGNRILTIGEVPKDQMYSVK
LKGVSVCFSMLKAVLSGNYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQ
SFYSLLEVLTQDHMNFIASLEPHVVMYILSSISEGLTALDTMVCTGCCSSLDHIATYLFK
QLSRSTKKRPVAMATDERFLHIMQQHPEMIQQMLSTVLNIIIFEDCRNQWSMSRPLLGLI
LLNEKVQYFADLRNSIVNSQPPEKQQAMHLCFENLMEGIERNLLTKNRDRFTQNLSVFRR
EVNDSMKNSSYGVNTNDMMS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgagagaggagcatgaatggagcaaaatggcggatcatgtgcagagcctagcc
cagctagagatcctgtgtaagcagctgtacgagacaacagagactggggtgaggttgcaa
gcagagaaagctctggtggagttcactaacagccccgactgtctcagcaagtgtcagcta
ctactggagagaggcagctcttcctactctcaacttcttgcagctacctgtctgtctaaa
ctggtttcgcgcaccaacaaccctcttcccttggagcagcgcatcgatatccggaactat
gtactgaactatctggcgacgcggccgaagttggcagagtttgttacccaggctctgatc
cagctgtactccaggattaccaagcttggctggttcgactgtcagaaagacgactatgtc
ttcagaaacgtcatcgcagacgtcacacgcttcctacagcaggacagtgtagaacattgc
atcataggagtcaccatcctatcccaactgaccaatgagatcaaccaggcagataccagc
catcctctgaccaaacacaggaagattgcgtcatcgttcagagactcgtccctctttgac
atattcaccctgtcttgcaatctcctcaaacaggcgtcgggtaagaacctcaacctgaat
gatgagagtcagcatggtctactgatgcagctactgaagctcagtcacaactgtctgaac
tatgatttcatcggaacgtctacagatgagtcctctgatgacctctgcactgttcagatc
cccacttcctggagatcagcgtttttggattcatccactctccagctcttttttgatttg
tatcattccatccctccctccctctccccgttggtgttgtcgtgtctagtccagatagca
tcagtgaggagatctctgttcaacaacgcagagcgagccaagttcctctctcacctggtg
gatggagtcaagaggatactagagaacccacagagcctctcagaccctaacaactaccat
gagttttgtcgtctcttggcgcgactgaaaagtaactaccagctgggagagctggtcaaa
gtagaaaactacccagaagtcatcaggcttatagccaacttcactgtcaccagtctacag
cactgggagtttgcccctaactctgtccactacctgttgagcctgtggcagcgcctggca
gcgtctgtcccttatgttaaagccaccgagcctcacctgctagagacatacacacctgaa
gtcaccaaggcctacatcacctcacgcctcgagtctgtctgcatcatactcagggatggg
ttagaggaccctctagatgacgcagggttagtccagcagcagttagaccagctctccacc
atcggtcgctgtgaatacgagaagacctgtgccctattggtccagctcttcgaccaatca
gcacagacctaccaggaactactgcagtctaccaactctagtaccatcgacatcactgtc
caggaggggaggttaacatggttggtgtatataatcggggcggtcattggaggaagagtg
tccttcgcctctacagatgaacaagacgccatggacggagaactagtttgtcgggtgctc
cagttgatgaacctaacagattcgcggctggcccaggcgggtaacgagcggttggagttg
gccatgctcagcttctttgaacagttcaggaaaatttacatcggagaccaggtgcaaaag
tcctccaagctgtaccggcggctgtcagaggttctggggctgaatgatgagaccatggta
ctcagcatcttcattggaaaaatcatcaccaacctgaagtactggggccagtgtgaacca
atcacttccaagacacttcagttactcaatgacctctctatagggtacagcagtgtgagg
aagttggtgaaactcagcgctgttcagttcatgctgaacaaccacacaagcgagcacttc
tccttcctgggcgtgaacaaccaatcaaacctcagcgacatgaggtgtcgcaccacgttc
tacaccgcactgggacgcctgctgatggtcgacctaggtgaggatgaggaccagtttgaa
caattcatgcttcccctaacggcggcgtttgaagcagtggctcagatgttcagcaccaac
acatttaatgagcaggaggcgaagaggacgttggtaggactggtcagagacctgagaggt
atcgcctttgccttcaacgccaagaccagctttatgatgctcttcgactggatctaccca
gcctacatgcccatcctgcagagagctatagagctctggtaccacgtaccagcatgcacc
actcctgtcctaaagctcatggccgagctagtccacaacaggtcacagaggttacaattt
gacgtttcatcacccaacggaatcctgctgttcagagaaaccagcaagatgatcaccacc
tatggtaaccgtatcctgaccattggggaggtgcctaaggaccagatgtacagtgtgaag
ctgaagggtgtcagtgtgtgtttctccatgctcaaggctgtgctctctggaaactatgtc
aacttcggggtgttccgtctctatggagatgacgcactggacaacgcgctacagaccttc
atcaaattgctgctgtccataccacacagcgacctgctggactatcccaagttgagccag
tcgttctacagtctgttggaggtgttgactcaggatcacatgaacttcattgcttctcta
gagccgcatgtcgtcatgtacatactgtcatctatctccgagggactcactgcactggat
actatggtgtgtactgggtgttgttccagtctggaccatatcgccacctacctgttcaaa
cagctgtctcgttccactaagaaacgacctgttgctatggcaacagacgaacgcttccta
cacatcatgcagcaacacccagagatgatccaacagatgctgtccacagtgttgaacatc
atcatctttgaggattgcaggaaccagtggtccatgtccagacctctattgggcctcatc
ctgctcaacgagaaggtacagtattttgcagacctgaggaacagcattgtgaacagccag
cctccagaaaagcagcaggccatgcatctctgctttgagaacctgatggaggggatagaa
cgcaacctgctaaccaagaacagagacaggttcacccagaacctctcggtgttccggagg
gaggtaaatgacagcatgaaaaactcttcatatggagtcaacaccaatgacatgatgagc
tga
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integrated database retrieval system
