Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422851
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Entry
139422851 CDS
T10872
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta-like isoform X1
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00230
Purine metabolism
ocla01100
Metabolic pathways
ocla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
139422851
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139422851
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
139422851
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GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
GAF_3
HD-CE
Motif
Other DBs
NCBI-GeneID:
139422851
NCBI-ProteinID:
XP_071030364
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Position
12:19535469..19552111
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AA seq
834 aa
AA seq
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MSATKEDVEKFLDGNPAFAQGYFNKKLTPGALSVMAGIPESNVDFGMLQELSQIEEGQIL
FDLIKEMQENVNMEKVVFKILKRIVALIQADRCSLFMYRERNGIAELATRLFNITTESEL
DDCVVHPDHEIVFPLDLGVVGNVAQTKKHINLKDANESSHFSSFVDDLTEYKTRNILASP
IMNGEDVVAVIMALNKTTGPHFTTEDEDLFLKYLRIASLNLKIYQLNYLYNCETRKGQVL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDIWPVLMGDQPP
YAGPVTPDGREVIFYKVIDYILHGKEDIKVIATPTLEHWVLCTGLPTYVAETGLICNIMN
PTTEEMFKFQSEPLDDSGWTIKNVLSMPIVNMMEEIVGVATFYNRKDGKPFDQQDEELME
AMTNFLGWSHLNTDTNDRMKMMENRKDIAQDMVLYHVKCRDDEIQTILKTRQYFNREPCD
CEEDEFLQILKKELPGPKKFEIYEFGFSDFDCTELELVMCGIQMYYEVGVVKKFQVPQEV
LVRFLFSISKGYRKITYHNWRHGFNVGQTMFTLLTTGNLKRYYTDLEVMAMITSAFLHDI
DHRGTNNLYQVKSGNPLAKLHGSSVLERHHLEFSKFLLADESLNIYQNLNRRQNEHAIHL
LDIAIIATDLQLYFKKRTMFQKIVDLSKTYEDEKKWVDWMSLETTRKEIVLAMMMTACDL
SAITKPWEVQSKVALFEAAEFWEQGDLEREVLEKQPITMMDRNCAGQLPKLQCGFIDFVC
TFIYKEFSRFHPAIQPMYDGLLNNRKEWKAKQEEYEAKQAILEAQSGSKTCSVC
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgacaaaggaagatgttgaaaagttcctggatgggaacccggctttcgcccag
ggctacttcaacaagaagctcacaccaggggccctctctgtgatggcggggatcccggag
tccaatgtggattttgggatgttacaggagctgagccagatagaggaaggccagatcctt
ttcgacctgatcaaagaaatgcaggagaatgtgaacatggagaaagtggtgttcaagatc
ctgaagaggatcgtcgccctgatccaagctgaccgctgcagcctgttcatgtaccgggag
aggaacggcatcgcggagctagccacgcgtcttttcaacatcaccacagagtctgagctg
gatgactgtgtggttcaccctgaccacgagatagtcttccccctggaccttggggtggtg
ggaaatgtggcccagaccaagaaacacatcaatttgaaagatgccaatgagagcagtcac
ttcagctcgtttgttgatgacctgacagagtacaaaaccaggaacatattagcctcgcct
atcatgaacggagaggatgtggtggctgtgatcatggccctgaacaagaccactggaccc
cacttcaccactgaggatgaggatctttttctgaagtatctcagaatagcctctttgaac
ctgaagatttaccagctgaactacctgtacaactgtgagactcgaaaaggacaggtcctg
ttgtggtccgccaacaaggtgtttgaggagctgacagacattgagagacagttccataaa
gccctgtatacagtgcgggcatacctgaactgtgacaggtactctgtgggcctactggat
atgacaaaggagaaggagttctttgacatctggccagtgttgatgggagatcagcccccc
tacgctggacctgttactccagatggcagagaagtcatattctacaaagtcattgattat
attttgcatggaaaagaggatatcaaagttatcgcgactcccactctagaacactgggtg
ttgtgtactggattgcccacatatgtggccgaaactggtcttatatgtaacatcatgaat
cccacaacagaggagatgttcaagtttcagtcagagcccttggatgacagtggttggacc
ataaagaatgtgctgtccatgccaattgttaacatgatggaagagattgtgggcgtggct
acattctacaacaggaaagatgggaagccattcgaccagcaggatgaggagctaatggag
gctatgactaacttcctgggctggtcccacctcaacacagacactaatgacaggatgaaa
atgatggagaaccggaaagacatagcccaggacatggttctctaccacgtcaagtgccgt
gatgatgaaatacagacaatcctgaaaaccaggcagtatttcaacagagagccctgtgac
tgtgaagaggatgagtttctgcagattctgaaaaaagagctacccggccccaagaagttt
gagatctacgagttcgggttctctgactttgactgcacagagctggagctggtgatgtgt
gggatccagatgtactatgaggtcggagtggtcaagaagttccaagttccacaggaggtt
ctggtgcgtttcctgttctctatcagcaaaggctacaggaaaatcacctatcacaactgg
cgccacggtttcaatgttgggcagactatgttcacactgttgacgacagggaacctgaaa
aggtactacacagatctggaggtgatggccatgatcacatctgcttttctccatgatatc
gaccacagggggacaaacaacctctaccaggtgaaatcgggtaacccactagccaagctt
cacggctcgtctgtcctggagaggcatcatctagaatttagcaagttccttctggcagac
gagtccctgaatatctaccagaacctcaacagaagacagaacgagcatgccatccacctc
ctggacattgccatcattgcaacagacttgcaactctatttcaagaagcgaacaatgttc
cagaagattgttgacctatcaaagacctacgaagatgagaagaagtgggtggactggatg
tcactggagacgaccaggaaagagattgtcttggccatgatgatgacagcatgtgacctg
tcagccatcactaaaccatgggaggtgcaaagcaaggtggcgctgtttgaagcagctgag
ttctgggagcagggtgacttggaaagggaagttcttgaaaaacaacccattactatgatg
gacagaaactgcgctggccaactgcccaagctgcagtgtggtttcattgactttgtctgc
acattcatctacaaggaattctcccgcttccatccggccatccagccgatgtatgatggc
ctcctaaacaacaggaaggagtggaaggccaagcaggaagagtacgaggccaagcaggcc
atcctggaagcccagtcagggtccaagacgtgctcagtgtgctag
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