Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422858
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Entry
139422858 CDS
T10872
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139422858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139422858
04131 Membrane trafficking [BR:
ocla04131
]
139422858
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139422858
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139422858
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139422858
mRNA cycle factors
P-body specific factors
139422858
Membrane trafficking [BR:
ocla04131
]
Others
Actin-binding proteins
Myosins
139422858
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139422858
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139422858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
BTB_SANBR
nSTAND3
AAA_22
Ac76
Myosin_N
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
139422858
NCBI-ProteinID:
XP_071030377
LinkDB
All DBs
Position
12:complement(20479739..20556033)
Genome browser
AA seq
1838 aa
AA seq
DB search
MKRQQKEPNTIAKKQEEKIDYEVYCQYTRVWIPDPEDVWRAAEIIKDYTEGEAILYLKLE
DETPLEYRIGPKDNALPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTESNHIYTYC
GIVLVAINPYEQLQIYGEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSG
ESGAGKTVSAKYAMRFFATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKY
IQIGFDRSYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLALTSAE
DFIFTSQGENIFIEGVNDAEDFEKTREAFTLLGVNDSNQSSIFRIIASILHLGNVEICSE
RDGDSCHILKNDPHLAHFCQLLGVELEQMEHWLCHRKLVTTSETYVKNMSRKQAANARDA
LAKHIYAHMFDWIVEYVNKSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQ
QQFNQHVFKLEQEEYVKEQIPWTLIDFYDNQPCIDVIEAKLGILDLLDEECKVPKGTDQN
WCQKLYDRLSSSVHFQKPRMSNTSFIVIHFADKVEYQCDGFLEKNRDTVYEEQINILKAS
KFQLMADLFQDTNKDSSISTSSSSKSSRVNVRASKPTPKVPNKEHRKTVGHQFRSSLQLL
METLNATTPHYVRCIKPNDEKEAFSFESRRAVQQLRACGVLETIRISAAGYPSRWTYPDF
FNRYRVLMKKSDMTVGDKKLVCRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADK
FRSACIKIQKTVRGWLQRVRYQKIRKSAINLQRYGRGYMARRYAEQLRLTRAALIFQKQY
RMVRERRDYLRVRQAVVTIQAFTRGMLTRRIFQEFLLHHKAMIIQKHVRGWLTRRKFRRA
RNAAITIQCAYRLMRAKRELKQLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQTSDLKT
QNEQLMVAKASLGSEVNKLQKELEMMRSRQGDGSQLTSLQDELEKLRAELQEAHTHMKKL
EEKHSNEKMGLEQRVEELDRENSMLKSEKEEMNRRILHHSKSTEDQESSASQSVGRVQAE
LDEERQRYQNLLREFSRLEQRYDNLQEAKFQPGHKRNNSTQSSLESDSNYPSISTSELGD
TDDAIQLVEEMGVEKAAMDIGVFMKLQKRVRELEQERKRLQVNLEKMEDQVNCKGIEPKT
TSEQESEDLAYNSLKRQELESENKKLKNDLNELRKAIADRASQNSSSNELQDGYNLLLGQ
LKAANEELEVRKEEVLILRTQIVSEAHQKAETTNQIETNNVPEWTNSKKPIDKEEAVRAY
HGLCESKKLLEAQLQSQARKHEDELAAFNTQIELLKDDIEKKQEMLNHTMSLSPEAQVEY
SVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVPDMEVSLTAASSQPTKAKP
QLTRQVTVQRREKDFEGMLEYYKEDEALLVKTLITDMKPNAVSATVPCLPAYILFMCIRH
ADYINDDQKVHSLLTSTINAIKKVLKKNNNDFEMTSFWLANTSRLLHCLKQYSGDEAFMT
QNTAKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEHMMQPMIVSAMLESESIPSLA
GVKPMGYRNRSSSMDGEGPGSYTLEALIRQLGQFHSVMGEHGLDPEIAGQVVRQLFYSIN
AVTLNNLLLRKDVCSWSTGMQLRYNISQMEEWLRGKNLHQSGAVVNIEPVIQAAQLLQVK
KKTSQDAEAICSLCTSLTMQQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQDRNDVPML
LVDTKHTFPVLFPYTPSALSLETLHIPANLSLDFLTRV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaacagaaagaacctaacaccatagcgaaaaaacaagaggagaagattgac
tatgaagtttattgccagtacactcgggtgtggatcccagacccagaggatgtgtggaga
gctgcagagatcatcaaagattacacggagggagaggccatcctgtacctcaaacttgaa
gatgaaacgccgctggagtaccgcatcggacccaaagacaacgctcttcccttcctccgg
aaccctgatatcctggtgggggagaatgacctcacagctctcagctacctgcacgagcct
gctgtcctgcacaacctcaaagtgcgcttcaccgagtccaatcacatctacacatactgt
ggcattgtgctggtggccatcaacccctacgagcagctgcaaatctatggagaggaggtc
atcaatgcctacagtgggcagaacatgggagacatggacccacacatctttgctgttgct
gaggaggcatacaaacagatggccagagatgagaggaaccaatccatcatagtaagtgga
gagtcaggggcagggaagaccgtctctgctaagtacgccatgcggttcttcgccactgtg
ggagggtcagctaacgacaccaatgttgaggagaaggtgctggcctccagccccatcatg
gaggctattggaaatgcgaaaaccactcgcaacgacaacagcagtcgttttgggaagtac
atccagattggttttgacaggagttatcacatcataggagccaacatgcgcacgtatctg
ctggagaagtcaagggtagtctttcaggcagaggatgagaggaattaccacatcttctac
cagctgtgtgcctcggctagcttgccagagttcaaagacctagccttgaccagtgcagag
gacttcatcttcacatcacaaggagagaacatcttcattgagggggttaatgatgctgag
gactttgagaagacgagagaagcctttacgttactgggtgttaatgacagcaatcaaagc
agcatattcagaatcatagcttccatcctgcatctgggaaatgtggagatctgctcggag
agagacggagactcctgccacatattaaagaacgaccctcacttggcgcatttttgccag
ttgctgggggtggagctggagcagatggagcactggctatgtcacaggaagctggttacc
acgtcagagacctacgtcaagaacatgtctcgcaaacaggcagctaatgcacgcgacgca
ctcgccaagcacatctacgcccacatgtttgactggatcgtggagtacgtcaacaagtcc
ctgcacacctcctccaaacaacactctttcattggtgttctggacatctacggatttgag
acctttgaaataaacagctttgagcagttctgcatcaactacgccaatgagaaacttcag
cagcagttcaaccagcatgtgttcaagctggagcaggaggagtacgtgaaggagcagatc
ccctggacgctcatcgacttctatgacaaccagccttgtatcgatgtcatagaggccaag
ttgggaatcctggacctgctggatgaggagtgcaaggtgccaaaagggacagatcagaac
tggtgccagaagctgtacgatcgcctatcaagcagcgtccatttccagaaaccacggatg
tccaacacatctttcattgtcattcactttgctgataaggttgagtaccagtgtgacggg
ttcctggagaagaacagagacactgtctacgaggaacagattaacattctgaaggccagc
aagttccagctcatggcagatctgttccaggacactaataaagacagcagcatttccaca
tcttcctccagcaagtcctccagggtcaacgtgcgggcgtccaaaccaacacccaaagtc
cccaacaaggagcataggaaaaccgtgggccaccagttccgtagctccctgcagcttctc
atggagaccctgaatgccaccaccccccactatgtgcgttgcatcaagcctaatgatgag
aaggaggcattctcgtttgagtctaggagagctgtgcagcaactgagagcatgtggagtc
ctggagaccatccgcatcagtgctgctgggtacccatcaaggtggacgtacccagacttc
ttcaacagatacagagtcctcatgaagaagtcagatatgaccgttggagacaagaagctg
gtgtgcaggaacctgctggagaccctggtcaaggacccagacaagtttcagtttggtaag
accaagatcttcttcagagcaggccaagtggcctacctggagaagctgagggcagacaag
ttccgctccgcctgcatcaagatccagaagacggtgcgaggctggctgcagagggtccgc
taccagaagatccggaagtccgccatcaacctgcagagatatggccgtggatacatggcc
cgcaggtatgcggagcagctgcgtctaacccgcgctgctctgatcttccagaagcagtat
cgtatggtcagagagcggagggactatctaagagtgagacaggctgttgtcaccatccag
gcctttaccaggggcatgttaacgcgcaggatcttccaggagttccttctgcaccacaaa
gccatgatcatccagaagcatgtccgaggctggctcaccaggaggaagttcaggcgggca
cggaacgccgccatcaccatccagtgtgcctaccgcctcatgcgagccaagcgggagctg
aaacagctgaagattgaagcgaggtccgctcaacatctgaagaagctcaacacgggcatg
gagaacaagatcgtccagctgcagaggaagatggatgaccagaccagcgatctgaagact
cagaatgagcagctgatggtggccaaagcctccctgggctcagaggtgaacaagctgcag
aaggagctggagatgatgcgcagtcgccagggtgacggcagtcagctgacctctcttcag
gatgagctggagaagctcagggctgagctccaggaagcacacacccacatgaagaagctg
gaggagaagcacagcaacgagaagatgggactggaacagagagtggaggaactggacagg
gagaattctatgctgaagagtgaaaaggaggagatgaaccgaaggattctgcaccactcc
aagagcacggaagaccaggagagcagtgcatcccagagtgtgggtcgggtccaggcagag
ctggatgaggagaggcagcgctaccagaacctgctcagggagttctccagactggagcag
agatatgacaacctacaggaggccaagttccaacctggtcacaagagaaacaattctact
cagagcagcctggagtctgactccaactatccttccatttctacctcggagttgggagac
actgacgatgcaatccagctcgtagaggagatgggagtggagaaggcagcaatggacatt
ggtgtgttcatgaagctgcagaagcgtgttcgagagctggaacaggagaggaagagactg
caagtcaacctggaaaagatggaggaccaggttaactgcaagggaattgagccaaagact
acgtcggagcaagagagtgaggacctggcctacaacagtctcaagaggcaggagctggag
tctgagaacaaaaagctgaagaacgacctgaacgaactgaggaaggccattgctgaccgc
gcctcccagaacagctcctccaatgagctgcaggatggctacaacctgctgcttggccag
ctcaaagcagccaatgaggaactggaagtgcgcaaggaggaggtcctcatcctcaggact
caaattgtcagtgaagcccatcagaaagcggagacaaccaatcagatcgaaaccaataac
gtgcctgaatggaccaacagcaagaagcccatagacaaggaggaggctgtgagggcctac
catggactctgtgagtctaagaagctgctggaggcccagcttcagtctcaggccaggaag
cacgaggatgagctggcagcgttcaacacccagattgagctgctgaaggacgacatagag
aagaaacaggagatgctgaaccacactatgtctctgtcccctgaggcccaggtggaatac
agcgtccagcaggagatcacccgcctcaccaacgacaacctggacttaaaagagcttgtg
gagaaactggagaagaacgagaggaagctgaagaagcagctgaggatctacatgaagaaa
gttccagatatggaagtgtctttgactgcagcatcatcccagcccaccaaggccaaacca
cagttgacccgtcaggtgactgtccagcgcagagagaaggactttgagggcatgctggag
tactacaaggaggacgaggctctgctggtcaaaacactcatcactgacatgaagcccaat
gctgtatcagcaacagtgccctgcctacctgcctacatcctcttcatgtgcatccgccat
gcggactacatcaacgatgatcagaaggtccactctctgctcacctccaccatcaacgcc
attaagaaggtcctcaagaaaaacaataatgactttgagatgacctccttctggctggcc
aacacgagtcgtctgctgcactgtctcaagcagtacagtggagatgaggcgtttatgact
cagaacacagccaaacagaatgagcactgcctgaagaactttgacctggcagagtaccgc
caggtgctgagtgatctctccattcagatctaccagcagctcatcaaggtggcagagcac
atgatgcagcccatgatcgtgtcggccatgttggagagtgagagcatccccagcctggcg
ggagtaaagcccatgggttacaggaaccgctcctccagtatggacggggagggcccggga
agctacaccctagaggccctgatcagacagctgggccagttccacagtgtgatgggcgag
cacggcctggacccagagatagcaggccaggtagtccggcagctgttctacagcatcaac
gctgtcaccctcaacaacctgctgctcaggaaagacgtctgttcctggagcactggcatg
cagctcaggtacaacatcagtcagatggaggagtggctgagggggaagaaccttcaccag
agcggggcggtggttaacatagagcccgttatccaggccgcccagctgctgcaggtcaag
aagaagacgtcccaggatgccgaggcgatctgctccctgtgcacctctctcaccatgcag
cagatcgtaaaaattctcaacctctacaccccactcaacgagtttgaggaaagagtcact
gtgtcctttatccgaaacatccagaatcgtctgcaggataggaacgatgtcccaatgctc
ctggtggacaccaagcacaccttccctgtcctgttcccctacaccccttccgccctcagc
ctggagaccctgcacatccctgccaacctaagcctagacttcctcactcgagtctga
DBGET
integrated database retrieval system
