Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422864
Help
Entry
139422864 CDS
T10872
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139422864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139422864
NCBI-ProteinID:
XP_071030389
LinkDB
All DBs
Position
12:20677336..20732942
Genome browser
AA seq
2679 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPVLLQTVLSRNPNIFREKNIMQQPMMPQ
YKMSQNSMHGSPASTNYQQTTISHSPSSRFAPPQMGSDARFTPQQNSPVPSPYAPQSPAA
YMQQYPHPPSYSQHQQIQQGSPQRPVQPCLEVQTQPQASPHQNPSTPTLVASPMVPGGMR
NIHDNKVSGQISSNSANHNARHGSNEDYMNIVHRLGNEESDPSMRNASFPLRSPQSVCSP
AGSEGTPKAGLRPSLILHSPNPYASPRDSAPDLLLDSPDCKKKQKKLTKEEKEQLDKAAM
YDIVSSPSKDSTKLTLKLSRVKSTEMDPSGELLPGAEDQDTDLAYNSLQFSRTQQDLAHR
LAPGQGEQSGYQQVPVLQNTKQAGGVISGAVYDDAEMDALAEIERIERETLIERERCSKE
VQDKDKPLKKRKQDSYPQEPGAGGTAGATQPGVGGGNAGSKLAPQEASAASNGASRPALM
VSIDLQQAGRADGQPEVNIGTHTPALRSWPEDRLCPGDGPDSTGVLRLNSKTEGDTLQTA
DVRPEVIKQRADTPKKLGPDVRPETPKHKHENRRDSSKHRHDGKPDNSKARPDARMPDKP
RQRHEGRSDSGHREDRSRDSDPSRIRRPETPSKSSRGEHDSKHGRDRDRERGDKDRERKH
RTEAGDPRDRRSPEQRSRPESPRVKQEGRGGVDHSGRQRTDRPGPNLKSPNKEERRSGEE
RRSGDGSRNRQDSKQQPAENKQEFPAYLLGGVKSGGFKNFVIPKVKRDKDGHVLAAEMRK
PGLGSVVEGWKEPRVKLERLGLVEKMKTAAKPVVVLQKLSIDEVQKIIRERKDRSARSSK
SSKSRPSHWISEKESTMPLCERVKMNKRKRSTIKEKPKYAEVNSDDDDDDDDSVTESTRK
RHKKEREKTWEPDERRGSGRRGSGSRHRERSPEDSYDESPPPSMSDLARKMKKKEKQKKR
KAYEPKLTAEELMDSSTFKRFSASMDNILESLEDIDFNAMDDDEIPQELLLGKHQLSELA
SESAKIKAMGITFRLSSGKLVKVLNILEKNIQDGSKLSTLMNHDADAEDEERLWRDLIME
RVTKSADACLTALNIMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHG
GGLLSSRAKRAKSSTHKQRVIIMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPF
FVESVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDKDG
EPMYIQMVTALVLQLIQCVVHLPNNRDSHDEYDKKVDQDVLITNSYETAMRAAQNFLSVF
LKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMAL
RVASLDYLGTVAARLRKDGVTSKMDQRSIDRILRETQGNDETQQLQKALLDYMDENAETD
PSLVFARKFYIAQWFRDTLTEMEKAMKSQNQRGDEDSSEGQHHTKDIETTGEIMQRAEAR
KKYLRNIIKTAPSQFSTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGE
SAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRP
QLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIK
KLVNETFQKLWFTPTPNHDKDAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKTEEDAA
YKPARKACVQLVDNLVEHILKYEESLTDIENKGVNSNRLVSCITTLFLFSKIRSQLMVKH
AMTIQPYLTTKCNTQSDFMVICNVAKILELVIPLMEHPSETFLTTIEEDLMKLIIKYGMT
VVQHCVSCLGAVVNRVTRNYKFVWACFNRYYGALTKLKTQHSEDSNNPVLAANKPALLRS
LFTVGALCRHFDFDEEEFKGPTKVVIKEKVMELLLYFTKHEDEEVQTKAIIGLGFQFIQY
PGLMFMQDVMSLYNGILSDRKSSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQED
LKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSTVRHFALNVIALTLNQGLIHPVQCVPYL
IAMGTDPEPTMRNKADQQLVEIDKKYSGFIHMKAVAGMKMSYQVQQAIWSAKGTVIRGYR
QDETTSALCAHLFSMVRSNRQHRRAFLISLLNLFDDSSKIEVNMLLYMADNLACFPYQIQ
EEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRQREKKSKERKYQSEEENSSSSSSSEE
EHHRHSISSNSSDEDDEVVHRPKKPKHRAQAPVESDSDSDLEMEDLDKVMQRLPDNPIPL
LDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSHVHFSPHQT
LDFLTSDLANVELTYDIKRRIVKQYLDFKLLMEHLDPDEEDEEGEASASANARNKAITSL
LGGPSHQDHKNHHQDHKNHHQAPIETDDDESDGDEKTPVSSRRSRKHGDSAEASGHMNET
LAARDVIALCCPKYKDRPQIARIIQKTNTGYRVQWMAGSYSGVWGEAKKRDGRKTVPWVD
TIKESDIIYKKIALTSAHKLTNRVVQTLRSLYSAKEGTS
NT seq
8040 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgctgggatcgctagccttact
gacttgttaaaccagctgcccctgccatcccctctccccgccaccaccactaagagtctg
ctgttcaatgggaggattgcggaggaggtcaactgtctgctggcctgccgggatgagaac
ctggtgtcccagctggctcatagcctcaaccaggtttccacagagcacatagagctgaag
gataacctgggcagtgatgacccggagggagacgtgcctgtgctgctgcagacagtgctg
tctaggaaccccaacatcttcagggagaaaaatataatgcagcagccaatgatgccgcag
tacaagatgtcccagaattccatgcatgggagtccggcgtcgacaaactaccagcaaacc
actatctcacacagcccttctagtcgctttgcccctccacagatggggtcggatgccagg
ttcacgccccagcagaacagccctgtgcccagcccctatgccccccaaagccctgctgct
tacatgcagcagtaccctcacccacctagctactctcagcaccaacagatccagcaagga
agcccccagaggcctgtgcagccctgcctagaggtgcagacccagccgcaggcctccccc
caccagaacccctccaccccaaccttagttgccagccccatggttcctggcggcatgcgg
aacatccacgacaacaaggtctccgggcaaatttcaagcaactcagccaatcacaatgcc
agacatggctccaacgaagactacatgaacatagtccacagattagggaatgaggagagt
gatccttccatgagaaatgcctccttcccactccgttcgccccagtctgtttgttcccct
gctggcagcgaagggaccccaaaagcaggattaagacctagccttatccttcactcccca
aacccttacgcttccccccgtgacagtgctcccgacctcctcctggactctcctgactgc
aagaagaagcagaagaagctaactaaagaggagaaggagcagttggataaagctgctatg
tacgatattgtcagctctccctctaaagactctaccaagctgaccctcaaactgtcccgg
gtgaagtccactgagatggacccgtccggagagctcttacctggggcagaggaccaggac
actgacctggcctacaacagcctgcagttctcccggacgcagcaggaccttgcccacagg
ttagccccgggacagggggagcagtcaggctaccagcaggtccctgtgctccagaacact
aagcaggctggaggggtgatcagtggagctgtttacgacgatgctgagatggacgcgctc
gctgagatcgagaggatagaacgggagacgctcatagaaagggagcgttgctccaaagag
gttcaggataaagacaagccactgaagaagcggaagcaggactcgtatccccaagagcct
ggagctggaggtacagcgggggcaacccaacctggtgtgggagggggaaatgctggcagc
aagctggcaccccaggaggctagtgctgccagtaatggtgcgagccggcctgccctaatg
gtcagcatcgacctgcagcaagcaggtagagctgacgggcagccagaggtaaacataggc
acccacacccctgccctgaggagctggcctgaggaccgcctgtgtcctggggacggcccc
gactccactggagtcctgcggctaaactccaagacagaaggagacacactacagactgca
gacgtccggccagaggtcatcaagcagcgtgccgacacccccaagaagctgggccccgac
gtccgaccggagacccccaaacacaagcacgaaaacagacgagactcgtccaaacatcga
cacgatggcaaacctgacaatagcaaggcccgccctgacgccaggatgcctgacaagcca
cgacaacggcacgagggtcgctcagactctggtcacagggaggacaggtcccgggacagt
gacccatcccgcatccgcaggccagagacccccagcaagtccagcaggggggaacatgac
tccaaacatggacgggacagagacagggagcggggggataaggacagggagaggaaacac
aggacagaggcaggggatccacgggaccgacgatctccagagcagcgctccaggccagag
agcccgcgggttaagcaggaagggcgagggggggtggaccacagtgggcgccagaggact
gaccggccaggccccaacctcaaatcccccaataaagaggagaggaggagcggggaggag
aggaggagtggggacggcagcaggaaccgacaggactctaagcaacaacctgctgaaaac
aagcaggagttccctgcttacctgctggggggcgtaaagtctggaggctttaagaacttt
gtgattcccaaagtgaagcgggataaggacgggcatgtgttggcagctgagatgaggaag
cctggtctgggttcagtagtggagggctggaaggagccccgggtcaagctggagcgactg
gggctggtagagaagatgaagacagcagccaaaccggttgtggtgctgcagaaactcagc
atcgacgaggtgcagaaaatcatcagggagaggaaagatcgaagcgcacgcagctccaag
tcctccaagagcagaccctctcattggatctctgagaaagagtccaccatgccactgtgt
gagagggtgaagatgaacaaacgcaagcgcagcaccatcaaggagaagcccaagtacgct
gaggtcaactccgatgatgacgatgacgacgacgactctgtgacggagtctacgcggaag
cgtcacaagaaggagcgggaaaagacatgggagcctgatgagaggagaggctcagggcgc
agggggtccggcagccgccaccgtgaacgcagcccagaggattcatacgatgagtcccca
ccgcccagcatgagtgaccttgccagaaagatgaagaagaaggaaaaacagaagaaaaga
aaggcatatgagcccaagctgacagcagaagaactgatggactcctctacgttcaagagg
ttctcagccagtatggacaacattctggagagcttagaggacattgacttcaatgccatg
gatgacgatgagatcccacaggagcttctgctggggaaacaccagctgagtgaactggcc
agtgaatctgctaagatcaaggccatgggcatcaccttcaggctttcatctggtaagttg
gtgaaggtcctgaacatcctggagaaaaacattcaggacgggtccaaactctccacactg
atgaaccatgacgcagacgcagaagacgaggagcgactgtggcgtgacctcatcatggag
cgcgtgacaaagtcagctgacgcctgtctgactgccctcaacatcatgacgtcggcccgc
atgcccaaggcggtgtacatcgaggacgtgattgagagggtgctgcagtacaccaagttt
cacctgcaaaacaccctctaccctcagtatgaccctgtctacagagtggaccctcacgga
ggtggcttgctgagctccagggctaagagagctaaaagctccacacacaagcagagggtg
atcatcatgctctacaacaaggtgtgtgacatcgtcagcaacatctctgagctcctggag
atacagctgttgactgacaccaccatcctgcaggtctcctccatgggcatcactccattc
tttgtggagagtgtcagtgagctacagctgtgtgccatcaaactagtgactgcggtgttc
tctcgctatgaaaaacacaggcagctcatcctggaagagatcttcacctctctggccaga
ctacccaccagcaaacgcagcctcaggaacttcaggctgaacagcagtgataaggatggg
gagcccatgtacatccagatggtcacagctctggtgcttcagcttatccaatgtgtggtt
cacctcccgaacaacagggacagtcacgacgagtatgataagaaggtggaccaagatgtc
ctgatcacgaactcttatgagacggcaatgcgagcagctcagaacttcctgtccgtcttc
ctaaagaagtgtggcagtaagcagggagaggaggactatcgcccactgtttgaaaacttt
gtccaggacctgctgtctacggtgaacaaaccagagtggccagctgctgagcttctactc
agtctgctgggtcgtctactggtgcatcagtttagcaataagcagacagagatggctctg
agggtggcatcgctagactacctgggcaccgtcgctgcccgcctgcgcaaagacggcgtc
accagcaagatggaccagcgctccatcgaccgcatcctcagagagactcaaggcaatgat
gagacccagcagctgcagaaggccctgttggactacatggatgagaacgcagagacggat
ccatctctagtttttgccaggaagttctacattgcccagtggttcagggacactttgaca
gagatggagaaggccatgaagtctcagaaccagcgaggggacgaggactcttctgaaggc
cagcaccacaccaaggacatcgagaccaccggagagatcatgcagagagccgaggcacgc
aagaagtacctccgcaacattatcaagaccgcgccctcgcagttcagcacactgaggatg
aactctgacactgtggactatgatgactcttgcctgattgtcagatatttggcctctatg
aggccattcgctcagagcttcgatatttatttaacacagattctgagagtgctgggggag
agtgccatagctgtcagaactaaagccatgaagtgtttgtctgaggtggtggctgtagac
cccagtattctggccaggttggacatgcagcgcggggtccatggtcgtctgatggacaac
tccaccagtgtacgcgaggctgctgtggagctgctggggcgttttgtgctgagcagaccc
cagctcacagagcagtactatgacatgctgatcgagaggatactggatacgggtatcagt
gtgaggaagagggtgattaagatccttagagacatctgtctggagcaacccaccttcaac
aagatcactgagatgtgtgtcaagatgatccgcagggttaacgacgaggagggcatcaag
aaacttgtgaacgagaccttccagaaactctggttcacccctacacccaatcacgataaa
gacgccatgacccgcaagatcctcaacatcacagatgtagtgtctgcatgcaaagataca
ggctatgactggtttgagcagctgcttcaaaatctgctgaagacagaggaagatgccgcc
tataagccagccagaaaggcctgcgttcagctggtggacaatctagtggaacacatccta
aaatatgaagagtctctcactgacattgagaacaagggggtgaattccaaccgtctggtg
tcctgcatcaccaccctctttctgttcagtaaaatccgatcccagctgatggtcaaacat
gccatgaccatccagccttatctcaccaccaagtgcaacacccagagtgacttcatggtg
atctgtaatgtggccaagatccttgagctggtgatccctctgatggagcacccctctgag
accttcctcaccaccatagaggaagacctgatgaagctcatcatcaaatacggcatgacg
gttgtacaacactgtgtgagctgtcttggagctgtggtgaacagggtcactcgcaactac
aagtttgtgtgggcttgtttcaaccgttactatggtgccctgaccaagctgaagacccag
cactctgaggactccaacaaccctgttctggctgctaacaaaccggccttgctgcgctcg
ctgttcactgtgggggcactctgtcgccactttgactttgacgaggaggaattcaagggc
cccacaaaggttgtgataaaggaaaaagtgatggagcttttgctgtacttcactaagcat
gaagatgaggaagttcagaccaaggccatcattggtctaggcttccagttcatccagtac
ccagggctgatgttcatgcaggatgtgatgagtctgtacaatggcatcctgtcggacagg
aagagctctgtcaacctaaagatccaggtgctgaagaacctccagacatacctgcaggag
gaagactcgcgcatgcaggaggccgaccaacagtggaagaagctgtcgaagcaggaggac
ctgaaggagatgggtgacatctcgtcaggtatgagcagctccatcatgcagctgtacctg
aagcaggtgttggaggccttcttccacacacagtccaccgtacgacattttgccctcaac
gtcattgccctgacactcaaccagggcctcatccatcctgtacagtgtgtgccctacctg
attgccatgggaacggacccagagcccaccatgaggaataaggcagaccagcagctggtg
gagattgataagaaatacagcggcttcatccatatgaaggccgtggcggggatgaagatg
tcttaccaggtgcagcaggctatctggtcagctaagggtacggtgatccggggttaccgg
caggacgagaccacctccgccctctgcgcccacctcttctccatggtccgatccaaccgg
cagcaccgacgagccttcctcatctcactgctcaacttgtttgatgacagctcgaagatt
gaggtcaacatgctcctgtacatggcagacaacctagcctgtttcccctaccagatccag
gaggaacctctcttcatcatgcaccacattgacatcaccctgtctgtgtccggcagcaac
ctgctgcagtccttcaaggagtcccttctcaaagagccaaggcagcgggagaagaagtcg
aaagagaggaaataccagtcagaggaagagaactcgtcatcatcgtcgtcatcggaggag
gaacatcaccgtcacagcatcagctccaacagtagtgacgaggacgacgaggtggtccac
aggcccaagaagcccaaacaccgggcccaggcccctgtggagtcagactctgactctgac
ctggaaatggaggacttggacaaggtgatgcagcgtctgcctgacaacccgatccccctg
ttggactttgccaacgcctcacagggaatactactactattggttctaaagcagcatctc
aagaacctctacggcttctcggacagtaaaatccaaaagtactctccgacggaatcggcc
aaggtatacgagaaggcggtgaacaggaagagtcacgtgcacttcagccctcaccagaca
ctggacttcctgacctctgacctggccaacgtagaactcacctacgacatcaagaggagg
atcgtcaaacagtacctagatttcaagttactgatggagcatttggaccctgatgaagag
gatgaggaaggtgaggcgtcagccagcgctaacgccagaaacaaagccatcacttcattg
ctgggagggcccagccaccaggaccacaagaaccaccaccaggaccacaagaaccaccac
caggctcctatagagacggacgacgacgagagcgacggagatgagaaaaccccagtgtca
tcacggcggtcgaggaagcacggcgactctgcagaggcatcaggtcacatgaatgagacg
ttggccgccagggacgtcatcgccctctgctgccccaagtacaaggaccggccgcagatc
gcccgcatcatccagaagaccaacacgggctacagagtacaatggatggctggctcctac
tctggagtctggggcgaggctaagaaacgggacggacgcaaaacggtgccttgggtggac
actatcaaggagtctgacattatttacaagaaaatcgccttgacgagtgcacacaagctg
acgaacagagtggtgcagactttacggtcactgtactcagcgaaggagggaacttcctaa
DBGET
integrated database retrieval system
