Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422868
Help
Entry
139422868 CDS
T10872
Name
(RefSeq) transcription factor RFX3-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139422868
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139422868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
HisKA
Motif
Other DBs
NCBI-GeneID:
139422868
NCBI-ProteinID:
XP_071030395
LinkDB
All DBs
Position
12:complement(21014096..21082505)
Genome browser
AA seq
765 aa
AA seq
DB search
MQTPEAGAESASTVHTAVPVQPAGSAQQVSSQAQTVQQVQHVYPAQQVQYVEENSGVYTN
GNIRTYSYSEPQLYSQNSGGSYFDTQGSSSQVSTVVSSHGMANNGGGNGGLTMGLAGGQI
ISSSGAYLIGGNTMDNSAPHPAAQTTRASPATVSIEMAIETLQKTEGLSSQRSSLLNSHL
QWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTR
GNSKYHYYGIRLKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPMQKVDGVSGENFSGGGQ
HTPSAAEQTVIAQSQHHQQYLDTSRALPDFVELVLGETNVENVGPDDIKALQSLYREHCE
AILDVVVNLQFSLIEKLWQTFWRYSPSDSVEGATITENSGVSEIEGRLPCCRLLVLCRNE
AVLKWMSSCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNTIPQRMI
QTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC
QCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQVLQPFEDRPSFPRAARQFLLKWS
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGQTPISVMGEFDDLNA
MSPANIDKDEVSEMDSDLEEDMEESGEPLAKREKAEVEHEHQVIQVIQVGALEDGSNPVV
GVLQPGILHSLPQPPQNHAEHILTTSAATTTIRHCSATGNTYASV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccctgaggcaggcgctgaatccgcctccactgtccacaccgctgtgcctgtg
cagcctgcaggctccgcccagcaggtgtcctcccaggcccagactgttcaacaggttcag
catgtatacccagcacaacaggtgcagtacgtggaggagaacagtggcgtctataccaac
gggaacatacggacatactcgtactccgagccccagctgtacagccagaacagtggaggg
agctactttgacacgcagggcagctcatcccaggtgtctacggtggtgtcatcccatggc
atggccaacaacggaggggggaacggggggctgaccatgggtctggctggggggcagatc
atcagcagctctggggcctacctcatcgggggcaacaccatggataattctgccccccac
ccagcagcccagaccacccgagcctccccggccactgtgagtattgaaatggcgattgag
acgctccaaaagactgaaggtttatccagtcagagaagctcactactcaacagccatctg
cagtggctactggataactatgagacagcggagggggtgagtctgcctcgctccaccctc
tacaaccactacctgcgccactgccaggagcagaagttggacccggtcaacgctgcttcc
tttggcaaactcatccgctccatcttcatgggactccgcacgcgtcgcctgggcacacga
gggaactcgaagtaccactactatgggatccggttgaagccggactctcctctcaacaga
ctgcaggaggacatgcagtacatggccctcagacagcagcctgtccaacagaaacagagg
tttaagccgatgcagaaggttgatggtgtatctggggagaacttctcaggcggaggccag
cacacccccagtgcagcagagcagactgtcatcgcacagagccagcaccaccagcagtac
ctggacacatcgcgggccctgccagactttgtggagctggtcctgggagagaccaacgtg
gagaacgtcggcccagacgacatcaaagctcttcagtcactctacagagagcactgtgag
gccattctggatgtggtggtcaacctccagttcagtctaatagagaagctgtggcagact
ttctggcgctattctccttctgactcagtggagggcgccaccatcacagaaaacagtggt
gtgagtgagattgagggccgtctgccctgctgcagactgctggtgctctgtaggaacgag
gctgtgctcaagtggatgagttcctgtgaccacctgatgtaccaggccctagtggagatc
ctcatccctgatgtcctcagacccatccccagtgccttgactcaagccatccgcaacttt
gccaaaagcctggaaggctggctcaacaatgccatgaacaccattccacagagaatgatc
cagaccaaggttgccgctgttagtgcctttgctcagacgctgcgtcgctacactagtctg
aaccacctggcccaggcagcacgcgccgtgctgcagaacacctcccagatcaatcagatg
ctcagcgaccttaaccgcgtcgacttcgccaacgtgcaggagcaggcgtcgtgggtgtgt
cagtgtgaggagggtgtggttcagaggttagagcaggacttcaaggccaccctgcagcag
cagagctctctggagcagtgggctgcctggctggacaacgtggtcacccaggtcctacag
cccttcgaagacaggcccagcttccccagggcggcacgacagttcctgctcaagtggtcc
ttctacagctccatggtgattcgggacctgaccctgcgcagcgcggccagttttggctcg
ttccacctgatccgcctgctctacgacgagtacatgttctacctggtggaacaccgcgtc
gcccaggcaaccggccagacacctatcagtgtcatgggagaattcgatgacctcaacgcc
atgtcacctgctaacatagacaaagacgaggttagtgagatggacagtgacctggaggag
gacatggaggagtccggggagccgctggccaagcgggagaaggctgaggtagaacatgag
caccaggtgatccaggtgattcaggtgggggctctggaggacggcagtaaccccgtggtg
ggggtgctccagccgggcatcctgcactccctgccccagcccccccagaaccatgctgag
cacatcctcaccacctccgccgccaccaccaccatccgccactgcagtgccaccggcaac
acctacgcctccgtctga
DBGET
integrated database retrieval system
