Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422876
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Entry
139422876 CDS
T10872
Name
(RefSeq) ARF GTPase-activating protein GIT2-like isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139422876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139422876
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139422876
Endosome - Golgi transport
Arf GTPase associated proteins
139422876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
TTRAP
DUF7783
K-box
LCIB_C_CA
Motif
Other DBs
NCBI-GeneID:
139422876
NCBI-ProteinID:
XP_071030412
LinkDB
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Position
12:complement(21975484..22010047)
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AA seq
744 aa
AA seq
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MSKRLRSREVCADCSSQGPCWASVNRGVLICDECCSIHRGLGRHSSQVRHLTHTPWPPSQ
LQMVQKLYSNGANSIWEHSLLDPSSITSGKRKANPQDRVHPHKTEFIKAKYQMLAYVHRM
PCREDDSVTTKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNSPLHVAAKACQV
SQAELLAVYGADSGALDTGGKTPVDYARQAGHQELADRLVEIQYELTDRLAFYLCGRRPD
HRNGQHFIIPQMADSSLDLSEFAKAAKKKLQSLTNHQFEELAMDVYDEVDRRETDAVWLV
TQNHSTLVTDTTLVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILTDAKRRQRGN
SCESPREDIELILKGIGSRHGSDNQDNEDQPDYDSVASDEDPEREPASGKNGKDDRTKSS
ESSDLSDGPITVQEFMEVKSALTASEAKIQQLLKVNCHLSEEIRMMQSKLNSLQTENSTL
QWQAPRGSQHPPDPSGHPPVHGGRPMSMYETGSGMRQYPHRGDPPCRADGLTIQPLPTNI
GRGPLGTASSSLPTFPSSLSWSWDERARRGCSLEGQSMLESDYDNTPNHSGPEESGLSRN
SSWLGDGSTSDQGEDETEADSTLPFTEDVICKTEQITKNIQELLRAAQENKHESFVPCSE
RIHVAVREMATLFPKRPYSDTVRGSLRLLTSSASRLQGECQKATTHDPCPSDMQLVTQQV
IQCAYDIAKAAKQLVTVTTKENSN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggctgcggagcagagaggtctgcgctgattgtagctcccagggcccgtgc
tgggcctcagtgaacaggggcgtgctgatctgtgatgagtgctgcagcatccaccggggt
ctgggccgacacagttcccaagtccgacacctgactcatacaccatggccaccctcccag
ctacagatggttcagaaattgtacagcaatggggccaactccatctgggagcacagcctt
ctggacccctcgtctatcacgagtgggaaacgcaaggccaacccccaggacagagtccat
ccccataaaactgaattcatcaaggccaaatatcagatgctggcgtatgtccatcgaatg
ccctgtcgagaggatgacagtgtcaccacaaaggacctcagtaagcaactccactccagt
gttcggactgggaacctggagacgtgcttgagactgttgtctttgggagcccaggccaac
ttcttccacccggaaaaaggaaacagtccactgcatgtagcagctaaggcatgtcaggtg
tcacaagcagagctgctggctgtgtatggggcggattctggtgccctagacacagggggt
aagacccctgttgactacgcaagacaagcaggccaccaggagctggcagacagactggta
gagatccagtatgaactcacagaccgcctggcattttacctctgtgggagaaggccagat
cataggaatggacaacacttcataatcccacaaatggctgacagcagtctggatttgtca
gaatttgctaaagctgcaaaaaaaaaactccagtctctcactaaccatcagtttgaagag
cttgccatggacgtttatgatgaagtggacagaagagaaactgatgcagtgtggctcgtg
actcagaaccacagcactctggtaacagatacaactttggtgcctttcctccctgtcaac
cctgaatactcatccaccaggaaccagggcagacagaagctagcaaggttcaatgcacat
gaatttgcaacactcgtcattgatattttaactgatgccaaacgtcggcaacgggggaac
tcctgtgaaagtcccagagaggacatagagctcatcctgaagggaatcggcagccgtcat
ggaagtgataaccaggataatgaagaccaaccagattatgacagtgtggcgtcagatgaa
gatccagagcgggaacccgcctctgggaagaatgggaaagatgacaggaccaagagctcg
gagtcgtctgacctgtctgatggacccatcacagtacaggagttcatggaggtgaagagt
gccctcacagcctccgaggccaagatacagcagctgctcaaggtcaactgtcacctgagt
gaggagatccggatgatgcagagcaagctgaactccctgcagactgagaactcaaccctg
caatggcaggcccccaggggctcgcaacaccctccggacccctctggccacccccctgtc
cacggaggccgccccatgtccatgtacgagacaggctcgggcatgaggcagtacccccac
aggggtgaccctccttgccgtgccgacggcctcaccatacagcccctccctacaaacatt
gggaggggtcctttggggaccgcctcatcctccctccctaccttcccctcctccctgtcc
tggtcgtgggatgaaagagctcgaaggggttgcagcctagagggacagagcatgctggag
agtgactatgacaacacaccaaaccactccggaccggaggagtctggtctgagcaggaac
agcagttggctgggggacggcagtacatcagatcagggggaggatgagactgaggcagac
tccaccctacccttcaccgaggacgtcatctgtaagacagagcagatcaccaagaacatc
caggagctgctgagggctgcacaggagaacaaacatgagagctttgtaccatgctcagaa
aggatccatgtggctgtgagggagatggccactctgtttcctaagaggccgtactctgac
acagtgagagggtccctgcggctgctcacctccagtgccagccggctccagggggagtgc
caaaaggccacgacccacgacccttgcccctccgacatgcagctggtcacgcagcaggtc
atccagtgcgcctacgacattgccaaggctgccaagcaactcgtcactgtgacaaccaaa
gaaaacagcaactga
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