Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422901
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Entry
139422901 CDS
T10872
Name
(RefSeq) uncharacterized protein
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139422901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139422901
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139422901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
139422901
NCBI-ProteinID:
XP_071030464
LinkDB
All DBs
Position
12:23244819..23280225
Genome browser
AA seq
1618 aa
AA seq
DB search
MSLSDQSRQCYPTSVQVTVVQARSLRIKGKNGTNDAYAIMQVAKDKFATSVAEKSVAPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGPDKLLGQAVINLLELSEVKSRNKTEWHK
LLDKAGKPDKDRGEVQVDIQFMKNNMTASMFDLSATEKPHSRLGRFKDKVRGKKEGLSDT
ASAVVPSFIQVLTDSEGEGEGGTDKGEKKKKNKLKSLFSPKSNLQRHRLSQSMSVLGPLP
EKNSSLSGSRSTGLNVDSSEGKNKFKFQTHKRTSSSLSLGRSKIPAPLAEQSNLCINGTH
MYTEEPQPRSARTGSNFSLASSGHGSMEDLRKAQGRKSSGTSMDSFRALKQPSTWAEEEE
RAMLDEERKKKEEQERKKLDEEERIRKEEQEKSRITEEEGEEMRLEEEQEERSLKVEGEN
SIWKEKWRLEEKRREMEEQERWEEEERIRREEHEIMRREDILRKEDERKMREVEERLKRE
KDERIKEEERIRGEQEEGMQRREEEERKMREEEERLRREQEDILRKIREEERRGKERIKR
AAEEKMKREENRVKEEEEERRRFEEEEEGRMKREAEEGRMKREDDRLKEEEEEKKGRIEA
EEERMKREEDRVRKEEEEEERRRFEEEEEERMKREEDRVRKEEEEEENKRRIEAEEERMK
REEDRVRKEEEEEERMRFEEEEEERMKREEDRVRKEEEEEERRRRFEEEEGRMKREEDRV
RKEEEEEERRRFEEEEEERMKREEDRVSREEEEEERRRRFEEEEGRMKREEDRVSREEEE
EERRMRIEEEEGRIKREAEEERMKREEDRLRKEEEEERRRRIEEEERVRKTAEEDWLREE
MGIKRMEEDKIIKREEEDRLRKEEELRKIREKEERLRREEEDDMRRNEEEQRKMKNEEER
RIEQEMLRKEEAERTRIEEEREEDRRRDEEQGKLMEAKERFRVDVENMKKEDLRGQEEEM
TEKEKKRNAQMEKKRRHEEVRVKLDKVEQPMKQNREAESIVCNNPFEEVSPTTSCDDNSS
NILFEETPTTSPTGSISCRTNKVSAVKQRPSSCVNPSQPSVSSNPFLSFLSPEIEIYMDS
PRGDWETRGTQDPSTDIMEKKDPAPLPLNQRWARMDNWPSKGNAQSVTVNLARTKPTKQP
PPPIRQSSTSLVGCGDNQESVSGQDHSSIRMDKGPAPDRPSQAPSQTQRDQSMTRVNLGH
KDIGASMSKVSQRVVQIITPLRFSSTATTEHTSGGQSSTHHGNQPEQEMPSATGGLRVAK
HNKGPAPSRPQYPPGKTMPKVDVIDKQLNTEEHDSLVEFDPNNPFAEDCRMEKSSGHGEE
QRLTGEYQESLDSPNHQSCTSIEANPGSMQNSVVRDSMELPTPDVLLAEDGFRPIKNSLA
ELVFVPLLPLKKTSISREEDTGKQSSVKLQTPGASSLSKLSSSISEKLQNRGVGMALTCV
TIAQPPCVPSPAPAILTQPKPLKGSGGRSNCPPQTSSLPGQRTLLQARAMSSVAEHCSGE
EAGGRGDRPTSSTRRPHPVKPLSSLENQPASNIQERQAGISTGILGVLQEKIKVKDTGVK
GQYSQLTQEELISLVVKQQDQLSKRDNKIKELEQYIDNLLVRIIEEQPSILMSMNSLK
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcagaccagagccgacagtgttatccaaccagtgtacaggtaactgtggtt
caggcaagaagcctgaggataaaggggaaaaatggcaccaacgacgcatacgccatcatg
caggtggccaaggataaattcgctacatcggtggcagagaagagcgtggcaccggtgtgg
aaagaagaggccacgttcgagctgccgctcttccacaacggtaacacagaaaagtgtacg
ttgcacgtccacgtaatgcaccgggctctcgtgggacctgacaagttgctcggccaagca
gtcatcaacctgttggagctcagcgaggttaaatcccgtaataagactgaatggcataaa
ctgctggacaaggcaggcaagccagacaaagaccggggagaggtgcaggtggacatccag
tttatgaagaataacatgacagccagcatgttcgacctctctgctacagaaaagccgcac
tcccgcctgggaaggttcaaggacaaggtgcgaggcaaaaaggagggtctgtcggacact
gcgtctgccgtggtaccgtccttcatccaggttctgacggacagcgagggggagggagag
gggggtacagacaaaggagagaaaaagaagaaaaacaagctgaagtctctgttttctccc
aagtctaacctgcagcgtcacagactgtctcagtctatgtctgtcctgggccctctgcct
gagaagaactcctcattgagtggcagccgctccacaggcctcaatgtggactcctctgaa
ggtaaaaataaattcaagtttcagacccataagcgcacaagcagttctctgtccctaggg
cgctctaagattcctgccccgcttgcagagcagagtaacctgtgcatcaacggcactcac
atgtacacagaggagccccagccccggagcgcccgcaccggctccaactttagcctggcc
agctcaggccatggctccatggaagacctgcgcaaggcccagggtcgtaagagctccggc
acctccatggactccttcagggccctgaagcagccttcgacctgggcagaggaagaagag
agggctatgttggatgaggagaggaagaaaaaggaagagcaggagaggaagaagttagac
gaggaagagaggataaggaaggaggaacaagagaaaagcaggattacggaggaggagggg
gaagaaatgaggctagaagaggaacaggaggagaggagtctgaaggtggagggagagaac
agcatttggaaggaaaagtggaggttagaggagaaaaggagagaaatggaggaacaagag
aggtgggaagaagaggaaagaattaggagagaagaacatgaaataatgaggagggaggat
atactgagaaaggaggacgagaggaaaatgagggaggtggaggaaagattgaagagggag
aaagatgagaggataaaggaggaagaaaggattaggggagaacaggaggagggtatgcaa
agaagagaggaagaggagaggaagatgagggaggaggaagaaagactaaggagggaacag
gaggatatactgagaaaaataagggaggaggaaaggaggggtaaagaaagaataaagaga
gcggctgaagaaaaaatgaagagagaggaaaacagagtgaaggaggaggaggaagaaagg
aggaggtttgaggaggaggaagaaggaagaatgaagagagaggctgaagaaggaagaatg
aagagagaggatgataggctgaaggaggaggaagaagaaaagaaggggaggattgaggcg
gaagaagaaagaatgaagagagaggaggacagagtgaggaaggaggaggaggaggaagaa
aggaggaggtttgaggaggaggaagaagagagaatgaagagagaggaggacagagtaagg
aaggaggaggaggaagaagaaaataagaggaggattgaggcggaagaagaaagaatgaag
agagaggaggacagagtgaggaaggaggaggaggaggaagaaaggatgaggtttgaggag
gaggaagaagagagaatgaagagagaggaggacagagtaaggaaggaggaggaggaggaa
gaaaggaggcggaggtttgaggaggaagaaggaagaatgaagagagaggaggacagagtg
aggaaggaggaggaggaggaagaaaggaggaggtttgaggaggaggaagaagaaagaatg
aaaagagaggaggacagagtgagtagggaggaggaggaggaagaaaggaggcggaggttt
gaggaggaagaaggaagaatgaagagagaggaggacagagtgagtagggaggaggaggag
gaagaaaggaggatgaggattgaggaggaagaaggaagaataaagagagaggctgaagaa
gaaagaatgaagagagaagaggataggctgaggaaggaggaggaggaagaaaggaggagg
aggattgaggaggaagaaagagtgaggaagaccgcagaggaagattggctgagagaggaa
atggggataaagaggatggaggaggacaaaataattaagagagaagaggaggataggctg
agaaaggaggaagagctgaggaagattagggaaaaggaagaaaggctaaggagggaggaa
gaggatgatatgcgtagaaatgaagaagagcagaggaagatgaagaatgaggaggaaagg
agaatagagcaggagatgttgagaaaggaagaagcagaaagaacgaggattgaagaggaa
agggaagaggatagaagaagagatgaggagcagggaaaactgatggaggcgaaagagagg
tttagggtggatgtagaaaatatgaaaaaagaggatttgagaggacaggaagaagagatg
acagagaaggagaaaaagaggaatgcacagatggagaaaaagcgaaggcatgaggaggtg
agagtaaagttggacaaagttgaacaaccgatgaagcagaatagagaggcagaatccatc
gtgtgcaataatccttttgaggaagtctctcctaccacttcatgtgatgacaactcttca
aatatcctgtttgaggagacccccacaacctctcctactggttccatcagctgccgaaca
aataaagtatcagcagtcaagcagagaccctcttcatgtgtgaacccttctcagcctagt
gtgtcttccaaccccttcttatcgttcttgtctcctgaaattgagatttatatggactcc
cctagaggcgattgggaaaccagaggcacccaggacccgtctactgatataatggagaag
aaagaccctgcccctctgcccctcaaccagcgctgggctcgtatggacaactggcctagc
aagggcaacgctcaatctgtcaccgtgaatctcgcccgaacaaagccaacaaaacagcca
cctcctccaatacgccaatcttccacatcactggtgggatgcggggataaccaggagagt
gttagtggtcaggaccattccagtatcaggatggacaagggtcctgctccagatagacca
agccaggctccaagccagacacagagggaccagagtatgactagagtgaacctgggacat
aaggacataggtgcctccatgtccaaggtctctcaacgtgtagtacagattatcacacca
ctgagattttcctccacagctacaacagaacacacaagtggaggccagagctctacccac
catgggaaccaaccagaacaagaaatgccatctgccactggggggttgagggtggctaaa
cacaataaaggtccagcaccttctaggccccagtaccctccagggaagacaatgccaaaa
gttgatgtaatagataagcaattgaatactgaggaacatgactctttggttgagtttgat
ccaaataatccctttgcagaagactgcagaatggagaagtcctctggacatggtgaagaa
cagagactaactggtgaatatcaggagagcctagactctcccaatcatcagagttgtacc
tccatagaagcaaatccaggttcaatgcagaatagtgtggttagggactcaatggagctt
ccaacgccagatgttctgctagctgaggatggcttccgtcccatcaaaaactcattagca
gagctggtctttgttcccttgcttccattgaagaaaacatccatctctagagaggaggat
actggtaaacagagttctgtaaaactacaaaccccaggggcttcctctttgagtaagctt
tcctcaagtatctcagaaaaactgcagaatcgaggtgtgggtatggcactaacttgtgtt
accattgcccagcccccatgtgtaccctcacctgcccccgccatcctaacccaacccaag
cccctgaagggatcagggggcaggagtaactgtcctccccagacaagctctctccctggc
cagaggaccctgcttcaggctagagctatgtcctccgttgcagagcattgcagtggagag
gaagcgggagggagaggggacaggcctacctcaagcacacgcaggccccatccagtaaag
cctttgagctccctggaaaaccagccagcctccaacatccaggagaggcaggctggcata
tctacaggaatcctcggtgtccttcaagagaagataaaggtcaaagacacaggggtcaaa
ggtcagtactcccagctgacccaggaggagctgatctccctggtggtgaagcagcaggac
cagctctccaagagggacaacaagatcaaggagctggagcagtacattgacaacctgctg
gtgcgcatcattgaggagcaacccagtatcctgatgtccatgaactcactcaaatga
DBGET
integrated database retrieval system
