Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422914
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Entry
139422914 CDS
T10872
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139422914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139422914
03012 Translation factors [BR:
ocla03012
]
139422914
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
139422914
Translation factors [BR:
ocla03012
]
Eukaryotic type
Release factors
139422914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
139422914
NCBI-ProteinID:
XP_071030485
LinkDB
All DBs
Position
12:complement(23932838..23940391)
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AA seq
446 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYHKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAATLFLCNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLTNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKAMEMGAVEILIVYENLDTMRYILRCHGAEGLAMAEKGTDEKTLYLTPEQE
KDKSHFTDKETGQDHELIESLPLLEWFANSYKKFGACLEIVTDKSQEGSQFVKGFGGIGG
ILRYRVDFQAIEYQGEDDELFDLDDY
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccaacgcagcggataggaacgtggagatatggaagataaagaagttg
atcaaaagtctggaagctgctcgggggaatggcacgagtatgatatccctgatcatcccg
cctaaggaccagatctccagagtggccaagatgttggctgatgagtttggcactgcatcc
aacattaaaagcagagtcaacaggctctctgtgcttggagccatcacctctgtacagcag
agactcaaactctaccataaagtgcctcccaacggcttggttgtgtactgtggcaccatt
gtgactgatgagggcaaagagaaaaaagtcaatatcgactttgagccttttaaacccatc
aacacttctctgtatctctgtgacaacaagttccacacagaggctcttacagcattgctc
tcagatgacagcaagtttggtttcattgtaattgatggaagtggcgccctcttcggaacc
ctacagggcaacaccagggaggtgctgcataagttcacagtggacctacccaagaagcac
ggcagaggaggacagtctgccttgcgttttgctcgtctgaggatggagaagagacataac
tacgtgcggaaggtggcagagacggcagccacgctttttttgtgcaacgacaaggtcaac
gtagcaggcatggtcttagctggttcagctgacttcaagacggagctcagccagtcagac
atgtttgacccgaggcttcaagctaagatcctgaagctggttgacatatcatatggtggg
gagaatggcttcaaccaggccattgaactgtccgcagaagtgcttaccaatgtcaaattc
atccaggagaagaaactaataggacgatactttgatgagatcagccaggatacggggaag
tactgctttggggtggaagacacactgaaagccatggaaatgggtgctgttgagatcctg
attgtttatgagaacctggataccatgagatacatcctacgttgccatggagcagaggga
cttgctatggcggagaagggtaccgatgagaagacattgtatttgacgccagagcaggag
aaagacaagtctcacttcacagacaaagagactggtcaggaccatgagctgatcgagagc
ttgccattacttgaatggttcgccaatagctataagaagtttggagcctgtctggagatt
gtcactgacaagagccaagaaggatcccagtttgtaaaaggctttggtggaattggtggg
atcttgcggtacagggtggatttccaggccatagagtaccaaggagaagacgatgagtta
tttgatttggatgactactag
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