KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422976
Entry
139422976         CDS       T10872                                 
Name
(RefSeq) charged multivesicular body protein 1b-like
  KO
K12197  charged multivesicular body protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272  Virion - Hepatitis viruses
ocla04144  Endocytosis
ocla04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    139422976
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139422976
  09143 Cell growth and death
   04217 Necroptosis
    139422976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139422976
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139422976
Membrane trafficking [BR:ocla04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    139422976
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139422976
  Exosomal proteins of other body fluids (saliva and urine)
   139422976
  Exosomal proteins of colorectal cancer cells
   139422976
SSDB
Motif
Pfam: Snf7 Ist1 DUF948 Mt_ATP-synt_D DUF5798 hGDE_central
Other DBs
NCBI-GeneID: 139422976
NCBI-ProteinID: XP_071030614
LinkDB
Position
12:28578293..28582965
AA seq 199 aa
MSNMDKHLFNLKFSAKELQRNSKKCDKEEKAEKAKVKKAIQKGNVEVARIHAENAIRQKN
QSVNFLRMSARIDAVASRVQTAVTMNKVTKSMAGVVKGMDATLKSMNLEKISGLMDKFEH
QFETLDVQTAQMEDTMSSTTTLTTPQNQVDSLMHELADEAGLDLNMELPQGQTGSVGTSV
ASVEQDELSSRLAKLRDQM
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtcgaatatggataagcatctcttcaatctcaagttttcagccaaagaactgcaacga
aactctaagaaatgtgacaaagaggaaaaggcagagaaggccaaagtcaaaaaagctatc
caaaaaggaaatgtggaagtggcacggatccatgcggaaaacgccatcagacagaagaac
cagtcggtcaacttccttaggatgagcgctcggatcgatgcagtggcctccagggtccaa
acagcagtcacaatgaacaaggtcactaaatctatggctggagtggtgaaaggcatggat
gccacactgaagagtatgaacctggagaagatctcaggcctcatggacaagtttgaacat
caatttgagacattggatgtgcagacagcccaaatggaggacaccatgagtagcacaacc
acacttaccacaccacagaatcaagtggattcactgatgcacgaattggctgatgaagca
ggtttggacctgaacatggagctcccacaggggcagactggatcagtgggcaccagcgta
gcatcagtagagcaggatgaactgtcttcaaggcttgccaaactccgagaccaaatgtaa

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