Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139422986
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Entry
139422986 CDS
T10872
Name
(RefSeq) ras-related protein Rab-4B-like
KO
K07880
Ras-related protein Rab-4B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139422986
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139422986
04031 GTP-binding proteins [BR:
ocla04031
]
139422986
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
139422986
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139422986
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
139422986
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
AAA_7
SRPRB
nSTAND_NTPase5
AAA_29
P-loop_TraG
ATPase_2
Septin
NACHT
AAA_22
ATPase
G-alpha
ADDB_N
Motif
Other DBs
NCBI-GeneID:
139422986
NCBI-ProteinID:
XP_071030623
LinkDB
All DBs
Position
12:28833303..28843476
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AA seq
214 aa
AA seq
DB search
MTETYDFLFKFLVIGSAGSGKSCLLHQFIENKFKQDSSHTIGVEFGSRVVMVAGKTIKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCG
NKKDLEADREVTFLEAARFAQENELMFLETSALTGENVEEAFLKCGRTILNKIDSGELDP
ERMGSGIQYGDTTVRQLRQSPQAGSAQGRDQCNC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgtatgatttcctttttaaattcttggtgattggaagtgcaggatcaggg
aaatcctgtcttctccatcaatttatagaaaacaagttcaaacaggactccagccacacc
attggggtggagtttggctcccgggtggtgatggtcgccggtaagacgatcaagctgcag
atctgggacacagctggacaggaacgattccggtcagtgactcgcagttattacagaggg
gcagcaggggctctcctggtttatgacatcaccagtcgggaaacgtataatgccctgacc
aactggttgacagacgctcgaacgctggccagtccaaacatcgtcatcatcctgtgtggg
aacaagaaagacctggaggctgacagagaagtcaccttccttgaggcggcccgcttcgcc
caggagaacgaactgatgttcctggagacgagtgccctcaccggagagaatgtggaggag
gccttccttaaatgtggtcgcaccatcctcaacaagatagattcaggtgagttagacccg
gaacggatgggctcagggatccagtatggtgacacaacggtgaggcagcttcgccagtcg
ccacaggctggctcagcacagggcagagatcagtgcaactgttaa
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