KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423014
Entry
139423014         CDS       T10872                                 
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like isoform X1
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00061  Fatty acid biosynthesis
ocla00071  Fatty acid degradation
ocla01100  Metabolic pathways
ocla01212  Fatty acid metabolism
ocla03320  PPAR signaling pathway
ocla04146  Peroxisome
ocla04216  Ferroptosis
ocla04920  Adipocytokine signaling pathway
Module
ocla_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    139423014
   00071 Fatty acid degradation
    139423014
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    139423014
  09143 Cell growth and death
   04216 Ferroptosis
    139423014
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139423014
   03320 PPAR signaling pathway
    139423014
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ocla01004]
    139423014
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ocla04147]
    139423014
Enzymes [BR:ocla01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     139423014
Lipid biosynthesis proteins [BR:ocla01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   139423014
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   139423014
  Exosomal proteins of breast cancer cells
   139423014
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-GeneID: 139423014
NCBI-ProteinID: XP_071030666
LinkDB
Position
12:29783146..29802254
AA seq 710 aa
MRFKVDMHYIVFSPVYLLMWLYTLITFIPWYFLTDAGKKKAMAKREKAKSTTGKAEGPYR
CVENFDNLAREDFEGKDTLDKLFEHAVQRFGNTDCLGTRELLNEENETQPSGKIFKKLIL
GEYRWLSYDEVDQIISHLGSGLAALGQQPKSTIAIFCETRAEWMITAQACFRRNFPLVTL
YATLGEEAVAYGLNECGATHLITSTELLETKLKSILPEMHNLKHVIYVDNKSIRRTGYPE
GIQIHSMQAVQELGAKPDNLRIAVQRPQPTDLAVVMYTSGSTGQPKGVMIIHSNLIAGMT
GQCERIPGLGPKDTYIGYLPLAHVLEMTAEISCMTYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSVLGPTLMAAVPEIMDRIYKNVMNKVQEMSYVQRTLFKLGYNYKLEQIKMGYDAPLC
NLLLFKKVKAQLGGNIRMMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITEV
ADYSTGRVGAPLICCEVKLRDWVEGGYTSQDQPHPRGEIMIGGPNVTMGYYKSEHLNNDF
WVDEQGQRWFCTGDVGEIHPDGCLQIVDRKKDLVKLQAGEYVSLGKVESALKNCPLIENI
CAYANSDQNYVISFVVPNQKQLTILANKNGISVAWEEICNHPAMEKEVLKAIKEVATSIK
LQRFEIPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHFQTDIERMYGGK
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgaggttcaaagtagacatgcattacatagtgttctcgcctgtgtacctgttgatgtgg
ctgtacacgctcatcacgtttatcccatggtatttcctcactgatgctgggaagaagaaa
gccatggcaaagagagagaaagccaagtccaccacaggcaaagcagagggcccctatcgt
tgtgtggagaactttgacaacctggcccgggaggactttgagggaaaggacactctagac
aagctgtttgagcatgcagtgcagcgcttcggcaacacagactgcctgggcaccagggag
ctcctaaatgaggagaacgagacccaacccagcggcaaaatctttaagaagctgatcctg
ggggagtacaggtggctgtcctatgacgaggtggaccagatcatcagtcatctaggtagt
ggactggcagccctgggccagcagcccaagagtaccatcgccatcttctgtgagacacga
gcagagtggatgatcactgcacaggcctgcttcagacgcaactttccattggtcactctg
tatgccaccctgggggaggaggcagtggcctatggcctgaatgagtgtggggccactcac
ctgatcaccagcacagagctactggagactaaactcaagagtattttgccagaaatgcat
aacctgaagcacgttatctatgtggacaacaagagcatcagaaggacgggttacccagag
ggcattcagatccacagcatgcaggcagtacaagagctgggagccaaacctgacaacttg
agaatagctgtgcagcggccccagcccacagacctggctgtggtcatgtacaccagcggc
tccacaggacaacccaaaggagtcatgatcatccacagcaatcttattgctggcatgacg
ggccagtgtgagaggatcccaggcctggggccgaaggatacctacattggctacctgcct
ctagctcatgtgctggagatgactgctgagatctcatgtatgacgtatggctgcaggatt
ggctactcttccccacaaacactctctgaccagtcaacaaaaatcaagaaaggcagtaag
ggagactgctctgtgttggggcctactctgatggcagctgttccggaaataatggaccgc
atctacaagaatgtgatgaacaaggtgcaggagatgagctatgtgcagaggactctgttt
aaactgggctacaactacaaactggaacagatcaaaatgggctatgatgcccctctctgc
aacttgctgctgtttaagaaggtgaaggctcagctgggagggaacatcaggatgatgctg
tcaggaggggcacccttgtcctccgccacacagcgattcatgaacatctgcttctgctgc
cctgtgggacagggctacggcctcacagagacctgcggagcaggtaccatcacagaggtg
gcagactacagcactgggagagtaggagcccccctcatctgctgtgaggtcaaactacga
gactgggttgagggtggatacaccagtcaggaccagccccacccgcgtggagagatcatg
attggtgggcccaacgttaccatgggttactataagagtgagcacctgaacaatgacttc
tgggtggatgagcagggccagaggtggttctgtaccggggacgtgggggagattcaccct
gatggctgtctgcagatagtggaccgtaagaaggacctggtcaaactgcaggctggagaa
tacgtgtccttggggaaagtggagtctgctctgaaaaactgcccccttattgaaaacatt
tgtgcatatgcaaacagtgaccagaactatgtgataagctttgtggtaccgaaccagaag
cagctgacaattctggccaataagaacggcatcagtgtcgcctgggaggagatctgtaac
cacccggccatggagaaagaggtcttgaaggccatcaaagaggtggctacctcaatcaaa
ctgcagcgttttgagatcccagtgaaagtgcgtctgagcccagagccctggacccctgag
actggcctggtgacggacgcattcaaactgaaaaggaaggagctgaagaaccacttccag
actgatatcgagagaatgtatggagggaagtag

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