Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423132
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Entry
139423132 CDS
T10872
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139423132
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139423132
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139423132
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139423132
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
139423132
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class I (G)
139423132
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139423132
Prokaryotic type
Other AARSs
139423132
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
139423132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1g
Cnn_1N
ADIP
Motif
Other DBs
NCBI-GeneID:
139423132
NCBI-ProteinID:
XP_071030919
LinkDB
All DBs
Position
12:complement(37368402..37380515)
Genome browser
AA seq
660 aa
AA seq
DB search
MGDPVAGYTSRIQQQELEIHSLTAELESLKNPQGLGLSSHLDGLREENAKLKYRLNVLKR
SLQEERSQCSKTMMNINQRLQEIFGEAIREACPDLENPPLAVTPNQQAKFGDYQCNSAMA
MAQMMKSKGLKVNPRQIAENIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLL
NGVQPPPLESKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPNYLTVSPPIGDLQAFYKESKKRFDEEEDFKKRAYQCVVKLQSK
DPAFIKGWNLICDVSRNEFQKVYNCLDIQIIERGESFYQEKMTAVVKEFEAKGLVEMDEG
RKIVFAPGQQIPLTVVKSDGGYTYDTSDLAALRHRLFDEKADIIIYVTDSGQGTHFQVVF
AAAQMIGWYDPNVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEK
DRDKVLSTEDLTKAQRSVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLANIDEAALRKAAETTEVLLEHDKEWKLGKCLLRFPEILQKILDDLLLHTLCDY
LYELATTFTEFYDSCYCIEKDRQTGEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcctgtggctggttacacgtcccgaattcaacagcaggagctggagatccat
tccctgactgcagagctcgagagcctgaagaacccacagggcctgggtttgtcctcgcac
ctggatgggctgagagaggagaatgccaagctcaaataccgcctcaatgtcctcaaaagg
agtctgcaggaggagaggagccagtgtagtaaaaccatgatgaacatcaaccagcgcctg
caggagatctttggggaggccatccgggaggcctgtcccgacctggagaaccctcccctg
gccgtcacccccaaccagcaggccaagtttggggactaccagtgtaacagcgctatggcc
atggcccagatgatgaaatcaaagggcctgaaagtgaaccccaggcagatcgctgagaat
attcagcagaacattcctgacaatgagctcattgagaagacagaaatagctggaccaggg
ttcatcaatgttcaccttaagagatcgtttgtgtccaaactgctgaccaacctgctactc
aacggtgtccaacctcctcccttagagagcaagaagaaggtggttgtggacttctcatct
cctaacatcgccaaggagatgcacgtaggtcacctgcgctccacaatcattggggacagc
atgtgtcgtctctttgagttcctgggctacgacgtcttgaggctgaatcacgtaggggac
tggggcacccagtttgggatgctcatcgctcacctgcaagacaagttcccaaactacctg
accgtatcccctcctatcggagacctgcaggccttctacaaagagtctaagaagcgtttt
gacgaggaggaggactttaagaagagggcctaccagtgtgtggtcaaactgcagagcaaa
gacccagctttcatcaaaggatggaacctcatctgtgacgtttccaggaatgaattccag
aaggtctacaactgtctggacatccagatcatcgagagaggagagtccttctaccaggag
aagatgaccgccgtggtcaaagagtttgaggccaaaggcctggtggagatggatgagggc
cgtaagatagtgtttgccccgggccagcagatccccctgacggtggtaaagtctgatggt
ggctacacctacgacacatcagacctggccgccctgcgccaccggctctttgacgagaag
gcagacatcatcatctacgtgacggacagcggccagggcacccacttccaggtagtgttt
gcagcggctcagatgattggctggtacgaccccaatgtgacacgagtggagcacgctggt
ttcggagtggtgctgggagaggacaaaaagaagtttaagactcgctccggggacacggtg
aggctgatggatctgctggatgaaggcctgaagaggtccatggacaaactcaaggagaag
gacagggacaaggttctgagcacggaggatctgaccaaggcccagcgttcggtggcgttc
ggctgcatcaagtatgccgacctgtctcacaaccgcatcaacgactacgtgttctccttc
gacaaaatgctggatgaccggggcaacacggccgcctacctcctctacgccttcacccgc
atcaggtccatagcccggttggctaacatcgacgaggcagcgctccgtaaagcagcagag
accacggaggtgctcttggaacacgacaaggagtggaagttgggcaagtgtctcctgcgc
ttccctgagatcctgcagaagatcctggatgacctgctgctccacacgctgtgtgactac
ctgtatgagctggccacgaccttcacagagttctacgacagctgttactgtatcgagaag
gaccgccagacaggtgaggtggtaaaggtcaacatgtggaggatgctcctgtgtgatgcc
actgccgccatcatggccaaaggcttcgacatcctgggcatcaaccctgtctccaggatg
tga
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