Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423229
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Entry
139423229 CDS
T10872
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139423229
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NCBI-GeneID:
139423229
NCBI-ProteinID:
XP_071031105
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Position
12:complement(44978197..45003562)
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AA seq
891 aa
AA seq
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MKGGGRGKEPPVEVEVSGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKPLLVRES
RGPEVACGGPMEVEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWW
AVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPCHTVSNARKKVWSFPSNS
PKGCATAKKVPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTAREISSSSSKSGATDV
TKHPENSSLFQLAELSSSTLQPSLTDTAGKGKPLSRGDQAETWSGTSQQGKSDVPKINVK
APLFQLAEQISSDSSQSTAPEGKQCSQSALFQLAEMCLASEAGKMETQDDTCAPHIKTET
VVKEDTGGNITDFPLSSPPSSSTSSSSTPTNASPPLLCGQAASVKKKKKKKKQEATAREP
PKAVDKDKIPRPGSPKKTLKKRPSSESELESLLYTIEAVAKGAWGDAEEDIPKKKASTAV
VTIPREPSSPKKKSKAKRPLKAKEEDEMEEDKEDGSRTELPSTVETAANLASPKTEAEEA
SIGSSPAGTEKPTAPPSPPHKVEEKQREAEANAEGCGSRKSERSCKGALYKTLVSEGMLT
SLRANVDRGKRGSFRSGSDEGGWTDETWAFSQMGPTNPKKLKKSKSKDETAPGLGKLEEE
FEKKFNSLPQYSPLTFDKKSTIVTKKKKPDVSTAPEEQPPKPAKGPSSSQKKTLFHKIVS
KYKQKKEKPNTVDKDIAMHSDSPMSDSAAKAKQTPAPCATATLSPEAMGTSASIPVGSQK
RKARKSKITHLVRSADGRVSPAEEDKVRDLTPEQDDKPLRETLCNETGCYSAPKQEEADR
SSAPEVLPAFFSLSALAEVAAMENIHRGQRVIGDSQKEMAQTPVLISCADQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggaggaaggggtaaggagcctcctgtggaggtggaggtgagcggcaagcgg
cccaagcgcaagtgtctacaatggcacccgctactctccaagaaggccctggacttctcg
gaggaggaagaggaggaggacgaagaagaactggagaagccgttgctggtcagggagagc
cgggggccggaggtggcatgcggggggcccatggaggtggaggaggactcttcagagcag
cgggcccgccgacccatgaacgccttcctgcttttctgcaagcgccaccgttcactggtg
aggcaggagcaccctcggctggacaaccgtggtgccaccaagatcctggctgactggtgg
gctgtgctggagcccaaagagaaacagaagtacacagacatggccaaggagtacaaggat
gccttcatgaaggctaacccaggctacaagtggtgccccaccactaacaagccagtcaag
agcccctgccacactgtcagcaacgcacgcaaaaaagtgtggtctttcccttccaactcc
cctaagggctgtgccactgccaagaaagtgcccaagactgacagcacaccacagcttaat
ttcgccatggcagatcccacaaagatgggtggcctaagcatgctactgttggctggggag
catgcccttactgccagagagatttcatccagttcttcaaagtctggagccacagatgtc
actaagcaccctgagaactcctccctattccaacttgctgagctctcctccagcacgctt
cagcccagtttaacggacacagctggcaaggggaagcccttgagtcggggggaccaggca
gaaacgtggtctggcacctcacaacagggaaaatctgacgtacccaagatcaacgtcaag
gcccctctttttcaactggcagagcagatctcctctgattcaagccagtcgactgcaccg
gagggaaagcagtgtagccagtcggctctcttccagctcgctgagatgtgtttggcctcc
gaggcagggaagatggagacacaggacgatacctgtgccccacacatcaaaactgagacg
gtggtcaaggaggacactgggggcaacatcaccgattttcctctttcctctcccccatct
tcctccacttcttcctcctccacgcccaccaatgccagtcccccgctgctctgcggccaa
gcggccagcgtcaaaaagaagaagaagaagaagaagcaagaagctactgccagagagcca
cccaaagcggtggacaaagacaagatccctcgtccgggttcgcccaaaaagaccctcaaa
aagcgaccatcgtctgagtctgagttggagagcctcctctacactatcgaggcagtggct
aaaggtgcctggggtgacgccgaggaggatatacccaagaagaaggctagcaccgccgtc
gttaccattccaagagagcccagctcaccgaaaaagaagtccaaagccaagaggcccttg
aaggctaaggaagaggatgagatggaggaggacaaagaggatggaagtcgcacagagctg
ccatcgacagtggagacggcagcgaatctagcaagccccaagacagaggctgaggaggcc
agcatcggcagcagccccgcaggcacggagaagcccactgcccctcccagccccccgcac
aaagtcgaggagaagcagagggaagcggaggccaatgctgaagggtgtggctccaggaag
tctgagagaagctgcaagggggcgctgtacaagaccctggtgtcggaagggatgctgacc
tcactgagggccaacgtggacagaggcaaaagaggctcttttcgaagtggatctgatgaa
gggggctggacggacgagacctgggctttctcacagatgggacccactaatcccaagaag
ctaaagaagtcaaaatccaaagacgagacggcgccaggtttggggaaactggaggaggag
tttgagaagaagttcaacagcctgccgcagtacagccctctgacgttcgacaagaaaagc
accatcgtcaccaagaagaaaaaaccagacgttagcaccgcaccggaggaacaacctcca
aaacctgccaagggtccatcttcatctcagaaaaagactttattccacaagattgttagc
aagtacaagcagaaaaaggagaaacccaatactgtggacaaagacatagcgatgcatagt
gactcccccatgtcagactctgctgccaaggccaagcagacccccgccccatgtgccacc
gccacgctttccccagaggccatgggaactagcgctagcataccggtgggcagccagaag
aggaaggctaggaagagcaaaataacccacctggtgcgctcggccgacggcagggtgtcc
ccagcagaggaggacaaagtcagggacctgaccccggagcaggacgacaagccattacga
gagactttatgcaacgaaacagggtgctacagtgcacccaagcaggaggaagcagataga
agcagtgcacccgaagtcctgcccgccttctttagcctgtctgcccttgccgaggtggca
gccatggagaacattcacagaggccagcgtgtgattggcgacagccagaaggaaatggcc
cagacccctgtcctcatctcctgcgctgaccaatga
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