Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423243
Help
Entry
139423243 CDS
T10872
Name
(RefSeq) unconventional myosin-VIIa-like isoform X1
KO
K10359
myosin VIIa
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139423243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139423243
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139423243
04812 Cytoskeleton proteins [BR:
ocla04812
]
139423243
Membrane trafficking [BR:
ocla04131
]
Others
Actin-binding proteins
Myosins
139423243
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
USH complex and associated proteins
139423243
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139423243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MyTH4
FERM_C1_MyoVII
RA_2
IRS
FERM_M
IQ
KRIT1_FRMD8_FERM_C
SH3_9
ABC_tran
PID
nSTAND3
AAA_22
SH3_2
Motif
Other DBs
NCBI-GeneID:
139423243
NCBI-ProteinID:
XP_071031147
LinkDB
All DBs
Position
12:complement(45921294..45992856)
Genome browser
AA seq
2139 aa
AA seq
DB search
MHPTSIHGVEDMIRLGDLNEAGILRNLLIRYNECVIYTYTGSILVAVNPYQLLPIYTPDH
IRLYTNKKIGEMPPHIFAIADNCYFNMQRNNKDQCCIISGESGAGKTESTKVILQFLAAI
SGQHSWIEQQVLEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKRGAIEGAKIEQYLLE
KSRVCRQAADERNYHIFYCMLRGMSPELKKKLGLGLATDYPYLTMGNCTKCDSRDDLKEY
SSILSAMKVLMFTETENWEISKLLAAILHMGKLRYEARCYDNLDACVVVRSPDLSTAASL
MEVDIKDVMSCLTTRTLITRGENVSTPLSMEQGLDVRDAFVKGIYGRLFVWIVDKINAAI
FRPPSCESKIIRRSIGLLDIFGFENFIVNSFEQLCINFANENLQQFFVRHVFKLEQEEYN
LEDINWQHIEFTDNQDALDMIGNKPMNIISLIDEESKFPKGTESTMLYKLNSQHKLNTNY
HAPKNTYETQFGIQHFAGVVHYETRGFLEKNRDSLHTDIIQLVHSSKNKFIKQIFQADVT
MFLCGYLPPTTPSPKGMETRKRSPTLSGQFKLSLELLMRTLNVCQPFFVRCIKPNELKKP
MLFDRELCVRQLRYSGMMETIRIRRAGYPIRYTFGEFVDRYRVLMPGVKPANRQDDLRGT
CQKIVEAVLGRDDDWEIGKTKIFLKDHHDMQLEIDRDKAITDKAILIQKAVRGMKARTNF
LRVRRSVTLIQKMWRGYRCRKDYSAMRVGFLRLQALYRSRKLFAAYQLARTCVTQIQARC
RGFMVRQSFWRQLHAVITIQAYARGMIARRVTQRLRAENRRRQKAEGQRLVEEERLRNQM
TVRRARAEAERSHKERLAELTRQEEEREKEAREEARRKKEMVEQVEREREQPVDHSDMVD
QMFGFLGNTGALPNLEGQGPAGFEDLEVALRAEDEEDLDEALPLPDDEEEDLSEYKFSKF
ATMYFQGTTTHKYVRRPLKQPLLFHEDEGDQLAALAVWITVLRFMGDLPEPKYHTAISDG
SEKIPVMTKIYETLSKRTYKRELQELQTVEGENSSNEGGGGQKKNSVRHKLVSLTLKRKS
KITEEVTRRLMDSDYSLQGNSMLEDRPTSNLEKLHFIIGNGILRPVLRDEIYCQICKQMT
QNPSKSSHARGWILLSLCAGCFAPSEKFVKYLRTFMISGPPGYAPYCEERLRRTFVNCTR
TQPPSWLELQATKSKKPIMLPVTFMDGTTKTLLTDSATTANELCNSLADKISLQDRFGFS
LFIALFDKVSSLGSGSDHVMDAVSQCEQYAKEQGAQERNAPWRLFFRKEIFTPWHNPGDD
SVATNLIYQQTVRGVKFGEYHCERDEDLAELASQQYYIEYGSEILQERLLNLIPSYIPDR
EISSAKTTDKWAQLVVSSHKKGVYTQKRLDPQKVKEDVVDFARFKWPLLFSRFYEAFKFS
GPSLPKNDVIVAVNWTGVYFVDEQEQVLLELSFPEITSVSSSRGGKLQGQSFSLATIKGD
EYTFTSNNAEDICELIVTFLEGLRKRSKFVVALLDCPNPAGGEDSTFLSFSKGDLILLDE
HCGEQVMTSGWAHGVNDRTKQRGDFPADCVYVLPTVTRPQYDIVALVTMTPDQRRESINL
SQMALAEIEDKVKPYTLEEFSYDYFRPPPKSTLSRVMITKGRGKERLWCCTREPLKQPLL
KKVLAQEELSQEAQLAFVALMKYMGDYPSKRARSVNELTDQIFEGALKAEPLKDEIYCQI
LKQITENHIKYSEEKGWELLWLCTGLFPPSNILLPHVQKFLQAKKHHHFAPDCMQRLQKA
LRNGSRKYPPHLVEVEAIQHKTTQIFHKVFFPDNTDEAFKVESSTKAKEFSLNISGRLLL
KSSEGFSLFVKITDKVISVPEGDFFFDFVRHLTDWIKKARPAKDGIVPSLSYQVFFMKKL
WTNTMPGKDSMADSIFHYYQELPKYLRGYHKCSREEVFQLGALIYRVKFEEDKSQFPNVP
KMLKELIPQDQIRHLSPEVWKRSILAFFNKQSGKTREEAKLSFLKVIFKWPTFGSAFFEV
KQTTDPNFPETLLIAINKHGVSLIDPKSKDILTTHPFTKISNWSSGNTYFHITIGNMVRG
TKLLCETSLGYKMDDLLTSYISQMLTTMTKQRGSRGNIK
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccacttccatccacggggtggaggacatgatccgcctgggggacctcaacgag
gccgggatcctgcgcaatctgctcatacgctacaacgagtgtgtcatctatacttacacg
gggtcaattctggtggcagtaaacccttaccagctgctgcccatctacacaccggaccat
atccgcctgtacaccaataagaagattggggagatgccacctcacatctttgccattgca
gacaactgctacttcaacatgcaaaggaacaacaaggaccagtgctgtatcatcagtggt
gagtctggggccggtaagacagagagcaccaaggtgatcctgcagttcctggcagcaatc
agtggacaacactcctggatagagcaacaggtcctggaggccaaccccatactggaagca
ttcgggaacgctaagactattcggaacgacaactccagtcgctttgggaaatacatcgac
attcactttaacaagagaggggccatcgagggggccaagatagaacagtaccttctggag
aagtccagagtctgcagacaggctgcggatgagaggaactaccatattttctactgtatg
ctgcggggcatgtccccagagctgaagaaaaagcttggcctgggactcgccactgactac
ccctacctcaccatggggaactgtacgaagtgtgacagccgtgacgacctgaaggagtac
tcaagtatcctgtcggccatgaaggtgctgatgttcacagagaccgagaactgggagata
tccaaactactggcggccatcctgcacatgggcaaattgcgctacgaggcccgttgctat
gacaacctggatgcctgcgtggtagtgcgatctccagacctgtccactgccgcatctctg
atggaggtggacattaaggacgtgatgtcatgtctaaccactcgtaccctgatcacccgg
ggcgaaaatgtgtccacccccctcagcatggaacagggcctggatgtcagggacgccttc
gtcaagggtatctatgggaggctgtttgtgtggattgtggacaagatcaacgcggccatc
ttcagacctccgtcctgtgagagtaagatcataaggaggtccattggcctgctcgacatc
tttggcttcgagaacttcattgtcaacagctttgagcagctgtgcataaactttgccaat
gagaacctgcagcagttctttgtgaggcatgtgttcaagctggagcaggaggagtacaac
ctagaggacatcaactggcagcacatcgagttcactgacaaccaggatgccctggacatg
atcggcaataaacccatgaacatcatatctctcatagacgaggagagcaagttccccaag
ggaacagagtccaccatgctatataaactcaactcccagcacaaactcaacaccaactac
cacgcccctaagaacacctacgagacccagtttggcatccagcactttgctggggtggtc
cactatgagaccagaggcttcctggagaagaatcgtgacagcctccacactgacattatc
cagctggtccactcctccaagaacaagttcatcaagcagatcttccaggctgacgtcacc
atgtttctgtgtggctatctgcctcccaccactccttctccgaagggtatggagaccagg
aagcgatcccctactctgagtggccagttcaagctttctctggagctgctgatgagaacc
ctcaatgtctgtcagcctttctttgtccgctgcatcaaacccaacgagctcaagaaaccc
atgctgtttgacagggagctgtgtgtgcgtcagctgaggtactctgggatgatggagacc
attcgtatcagacgcgccggttaccccatcagatacacctttggagagttcgtagaccgc
taccgtgtcctcatgcccggagtcaaacctgccaacagacaggatgacctgagagggacg
tgtcagaagatagtggaggctgttcttggacgagatgacgactgggagattgggaagacc
aagatctttcttaaggaccaccatgacatgcagctggagatagacagggacaaggccatc
actgacaaggccatcctcatccaaaaggctgtacgaggaatgaaggcgaggactaacttc
ctgagggtgaggaggtcagtgacactcattcagaagatgtggcgcggctatcggtgcagg
aaggactacagtgcgatgagggtcggcttcctgcgcctacaagccctctatagatcaaga
aaactctttgccgcctaccaattggccaggacttgcgtcactcaaatacaggcccgttgc
cgtggtttcatggtgaggcagtctttttggaggcagctgcatgcggtgatcaccatccag
gcatacgcccggggcatgatcgcaaggagggttacccagagactcagggcagagaaccgg
cggcgccaaaaggcagaaggccagcgtctggtcgaggaggagcgcctgaggaaccagatg
acggtgcgacgggcgcgggccgaggccgagaggagtcacaaggagcgcctggccgagctg
acccgtcaggaggaggagagggagaaggaggcacgggaggaggcacgacgaaagaaggag
atggtggaacaggtggagcgggagagggagcagccggtggaccactcagacatggtggac
cagatgtttggcttcctggggaacacaggggcactgcccaacctggagggacaggggccg
gctggcttcgaggacctggaagtggctctgcgggccgaggatgaggaggacttagacgaa
gctctccctctgcctgacgacgaggaagaggacctgtcggagtacaagttctccaagttc
gccaccatgtacttccagggcaccaccacacacaaatacgtgcggcgaccgctcaagcag
cctctgctcttccatgaggatgagggtgaccagctggcagccctggcggtgtggatcacg
gtgctaaggttcatgggggacctgcctgaaccgaagtaccacaccgccatcagtgacggc
tcagagaagatccccgtcatgaccaagatctacgagacgctgagcaagaggacatacaag
agagagctgcaggagctccagactgtggagggagagaacagctcgaatgaaggtggtggt
gggcaaaagaagaacagtgtgagacacaagctggtctctctcacactgaagaggaagtcc
aagatcactgaggaggtgacccggcgtttgatggacagtgattacagcctacagggaaac
agcatgttggaggaccggcccacctccaacctggagaagctgcacttcatcatcggcaac
ggcatcctaaggcccgtcctcagggatgagatctactgtcagatctgtaagcagatgacc
cagaacccatctaagagtagccatgcacgtggctggatcctgctctctctctgcgctggc
tgctttgctccctctgagaagtttgtcaaatatttgcgtacgttcatgatcagtggtccg
ccaggctacgctccatactgcgaggagaggttgaggaggacatttgtgaactgcaccagg
acccagccaccatcttggctcgagttgcaggccactaagtcgaagaaacccatcatgttg
ccagtgaccttcatggatggcaccactaagaccctgctgactgactcagccaccacagcc
aacgagctgtgtaattccctggccgacaagatcagcctccaagaccgcttcggtttctcc
ctctttatcgccctgtttgacaaggtatcctcattgggcagcggcagcgaccatgtgatg
gatgccgtgtcgcagtgcgagcagtatgccaaggagcagggtgcccaggagaggaatgct
ccctggcgccttttcttcaggaaggagatcttcacgccctggcacaatcctggcgacgac
agtgtggccaccaacctcatctaccagcagactgtccggggagtcaagttcggcgagtac
cactgcgagagggacgaggatctggcggagctggcgtctcagcagtactacatagaatat
ggctctgagatcctccaagagcgcctcctcaacctcatcccctcctacatccctgaccgt
gaaatcagctcagccaagaccactgacaagtgggcccagctagttgtctcttcccacaaa
aagggagtttacacccagaagaggttggaccctcagaaggtgaaagaggacgtggttgac
tttgctcgtttcaagtggcctttactcttctcacgcttctacgaggccttcaagttttca
ggacccagcctgcctaagaatgatgtcattgtagcagtgaactggaccggggtctacttt
gtggatgagcaggagcaggtccttttggaactctctttcccagagatcacttctgtgtcc
agtagcagagggggtaagctccagggccagagcttctcgctggccaccatcaaaggagac
gagtacacgttcacctcaaacaatgcagaggacatctgtgagcttattgtgacctttttg
gaaggcctcaggaagaggtcaaagtttgtggtggcgctgctggactgccccaaccccgcg
ggcggcgaggactccaccttcctcagtttttccaagggcgacctgatcctattggacgag
cactgtggcgagcaggtcatgacctcggggtgggctcacggggtcaatgacaggaccaag
cagcggggggactttccggccgactgcgtctacgtccttcccaccgtcacccggccgcag
tatgacattgtggctctggtaactatgactccagaccagagaagagagtccatcaacctg
tcccagatggccctggctgagattgaggacaaggtcaagccttacaccctagaggagttc
tcctacgactacttcagaccccctcctaagagcactctgagcagggtgatgatcactaag
ggccgggggaaggagcgtctgtggtgttgcaccagggagcccctcaaacagcctctgctg
aagaaggtgctggcccaggaagagctctcccaggaggctcaactggccttcgttgccctg
atgaagtatatgggtgactacccgtccaagcgagcacgttcggtcaacgagctgaccgac
cagatctttgagggagcgctgaaggcagagccactcaaagacgagatctactgtcagatc
ctcaaacagatcacagagaaccacatcaagtacagtgaggagaagggctgggagctgctg
tggctttgtacaggtctgttcccccccagtaacattctgctaccccacgtccagaagttc
ctccaggctaagaagcaccaccacttcgcccccgactgcatgcagagactccagaaggcc
ttacgtaatggatccaggaagtacccacctcacctggtggaggtggaggccatccagcac
aagaccacgcagatctttcacaaagtgttcttccccgataacacagatgaggctttcaag
gtggagtcgagcaccaaggccaaagagttctctctgaacatctcaggcagactgctcctc
aagtcttctgagggcttcagcctgtttgtcaagatcactgacaaggtcatcagtgtgcct
gagggggatttcttctttgactttgtaaggcatctgaccgactggatcaaaaaagctaga
cccgcaaaggacggtatagtgccttcactgagctatcaggtgttcttcatgaagaaactg
tggaccaataccatgccagggaaagactccatggccgactccatctttcactactaccag
gagcttcccaaatatctccgtggttaccacaagtgttcccgagaagaggttttccagctg
ggagctctgatctacagggtgaagttcgaggaagacaaatcccagtttcccaacgttccc
aagatgctgaaggagctgatccctcaggaccagattagacacctctcgcctgaggtctgg
aaacggtctatactggcattcttcaacaagcagtcggggaagactcgagaggaggccaag
ctgtcattcctcaaagtcatcttcaagtggcctacatttggctcggccttctttgaagtc
aagcaaaccactgatccaaacttcccagagaccctcttgatagcaataaacaaacatggt
gtcagcctgatcgaccccaagtcaaaggacatcttaacgactcacccgttcaccaagatc
tctaactggagtagtggaaacacctacttccacatcaccatcggcaacatggtccgaggc
accaagctgctgtgtgagacctcactgggctacaagatggacgacctcctgacctcttac
atcagccagatgctgaccacaatgaccaaacagcgcggttcccgtggaaacatcaagtga
DBGET
integrated database retrieval system
