Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423250
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Entry
139423250 CDS
T10872
Name
(RefSeq) homeobox protein otx5-like isoform X1
KO
K18490
homeobox protein OTX2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139423250
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139423250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
CPSF73-100_C
SatD
Motif
Other DBs
NCBI-GeneID:
139423250
NCBI-ProteinID:
XP_071031158
LinkDB
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Position
12:45635623..45642617
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AA seq
300 aa
AA seq
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MMSYIKQPHYAMNMSGMDLLHTTAGYPFSVSLDFSATPRKQRRERTTFTRNQLDILEAMF
SKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQSKPRPPKKKASPAQ
DQPSNGPDPSSNNPSGSYSPSPDPSGPSLPTSGNNPGNAPISIWSPAISPLPDPLASSAP
CMQRPSAYPMSYGQPQAYTQGYAGTSSYFTGLDCGAYLSPMHSQLSANGALSPITVPSMG
GSLSQSPASLSSQGYGTAASLGFTSVDCLDYKDQQAWKLGFSTMDCLDHKDQNSWKFQVL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcaaccccattacgccatgaacatgtctgggatggacctgcta
cacaccaccgctggatacccattctctgtgtctctggatttctcagccaccccgcggaag
cagcgtcgcgagcgcaccactttcacacgcaaccagctggatatcctggaggccatgttc
tccaagacccgctaccccgacatcttcatgagggaggaggtggccctcaagatcaacctc
cccgagtcgcgtgtacaggtgtggttcaaaaatcgccgtgccaagtgccgccagcagcag
cagcagagcagcggccagtccaagccccgcccgcccaagaagaaggcgtcaccggcccag
gaccagcccagcaatggccccgacccctcatccaacaacccctctggctcctacagcccc
tcccccgacccatcaggcccctccctgcccactagcggcaacaaccctggcaatgcaccc
atctccatctggagcccagccatctcgccactccctgaccctctggcctcctcggcgccc
tgcatgcagcggccctctgcctaccccatgagctacggccagcctcaggcctacacccag
ggctacgccggcacctcctcctatttcacaggcttggactgtggcgcctacctttcgccc
atgcactcacagctgtcggcaaacggcgccctcagccccatcaccgtgccctccatgggg
ggctcgctgagccagtcacccgcctcgctctcctcccagggctacggcacggccgcttcg
ctgggcttcacctctgtcgactgcctggactacaaagaccagcaggcgtggaagctgggc
ttcagcaccatggactgcctggaccacaaagaccagaattcgtggaagttccaggtgctg
tag
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