Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423661
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Entry
139423661 CDS
T10872
Name
(RefSeq) myosin heavy chain, fast skeletal muscle-like
KO
K24220
myosin heavy chain 1/2/3/4/8/13/7B/15
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139423661
04820 Cytoskeleton in muscle cells
139423661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139423661
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139423661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
DUF1664
Big_2
OVT1
AAA_7
AAA_22
NPHP3_N
Filament
AAA_16
Motif
Other DBs
NCBI-GeneID:
139423661
NCBI-ProteinID:
XP_071031370
LinkDB
All DBs
Position
13:complement(7806510..7819469)
Genome browser
AA seq
1392 aa
AA seq
DB search
MSTDAEMQIYGKAAIYLRKSEKERMEAQAAPFDSKNACYVADKVELYLKGLVTARADGKC
TVTVTKPDGTKDEGKEFKDADIYEMNPPKYDKIEDMAMMTYLNEASVLYNLKERYAAWMI
YTYSGLFCATVNPYKWLPVYDAEVVNAYRGKKRVEAPPHIFSVSDNAFQFMMIDKENQSV
LITGESGAGKTVNTKRVIQYFATIAVSGAKKEAEPGKMQGSLEDQIIAANPLLESYGNAK
TVRNDNSSRFGKFIRIHFQAGKLAKADIETYLLEKSRVSFQLPDERGYHIFFQMMTGHKP
ELVEMSLITTNPYDFPMCSQGQITVASINDNDELDATDDAITILGFTNEEKIGIYKLTGA
VLHHGNLKFKQKQREEQAEPDGTEVADKIAYLLGLNSAEMLKALCYPRVKVGNEYVTKGQ
TVPQVNNSVSALAKSIYERMFLWMVIRINEMLDTKNPRQFYIGVLDIAGFEIFDYNSMEQ
LCINFTNEKLQQFFNHTMFVLEQEEYKKEGIVWAFIDFGMDLAACIELIEKPLGIFSILE
EECMFPKSSDTTFKDKLYAQHLGKTKAFEKPKPAKGKAEAHFSLVHYAGTVDYNITGWLE
KNKDPLNDSVCQLYQKSGVKILAALYPAPPPEDKAKKGGKKKGGSMQTVSSQFRENLHKL
MTNLRSTHPHFVRCLIPNESKTPGLMENFLVIHQLRCNGVLEGIRICRKGFPSRIIYADF
KQRYKVLNASVIPEGQFMDNKKASEKLLGSIDVNHEDYKFGHTKVFFKAGLLGVLEEMRD
EKLASLVGMVQALSRGFLMRREFSKMMERRESIYAIQYNIRSFMNVKTWPWMKLYFKIKP
LLQSAETEKELANMKENYDKMTADLAKALATKKQMEEKLVSLTQEKNDLALQVASEGESL
NDAEERCEGLIKSKIQQEAKLKETTERLEDEEEINAELTAKKRKLEDECSELKKDIDDLE
LTLAKVEKEKHATENKVKNLTEEMASMDESVAKLTKEKKALQEAHQQTLDDLQAEEDKVN
TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERSKRKLEGDLKLAQESIMDLENDKQQADE
KIKKKEFETTQLLSKVEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRAD
LSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQAD
SVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSE
LKTKNDENVRQVNDISGQRARLLTENGEFGRQLEEKEALVSQLTRGKQAFTQQVEELKRA
VEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETD
AIQRTEELEEAK
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggacgctgagatgcaaatctacggcaaggctgccatataccttcgtaagtct
gagaaggagaggatggaggcacaagccgcaccctttgattcaaagaacgcctgctatgtg
gcagacaaggtggagctgtaccttaagggtctggtcactgccagggccgacgggaagtgt
actgtaacagtcacgaaacctgatggcactaaggatgaaggaaaagagttcaaagatgca
gacatctatgagatgaacccccctaagtacgacaagattgaggacatggccatgatgacc
tacctgaatgaagcctctgtgttgtataacctcaaagagcgttatgcagcatggatgatc
tatacctactctgggctcttctgtgccacggtgaacccctacaagtggctccctgtgtac
gacgcagaggttgtcaacgcctacagagggaagaagagagtggaggctccaccccatatc
ttctctgtctctgacaatgcctttcagttcatgatgattgataaggagaaccagtccgtc
ctgattaccggagaatccggtgcaggaaagactgtcaacaccaagcgtgtcatccagtac
tttgccaccattgcagtgtctggggccaagaaggaagcagaacctggcaaaatgcagggg
tctcttgaggatcagatcattgcagctaaccctctgctggagtcttacggtaatgccaag
acagtgaggaacgacaactcgtctcgctttggtaaattcatcaggattcacttccaagct
ggtaaactggctaaagctgacattgagacctacctgctggagaagtccagagtgtccttc
cagctgcccgatgagagaggctaccacatcttcttccagatgatgacaggccacaaacct
gagctagttgaaatgtcgctcatcaccaccaacccctacgacttccccatgtgtagccag
ggacagatcactgtggccagcattaatgacaatgacgagctggatgccacagatgatgcc
attaccatcctgggattcactaatgaagagaagattggcatctataagctgacaggagct
gtattgcaccatggaaacttgaaattcaagcagaagcagcgtgaggagcaggccgagcca
gacggcacagaggtggctgataaaatcgcctacctgctgggcctgaactcagctgagatg
ttgaaagctctgtgctacccaagagtgaaggtcggcaacgagtatgtgaccaagggacag
actgtgcctcaggttaataactcagtcagtgctctggccaagtccatctatgagaggatg
ttcttgtggatggtcatccgtatcaatgagatgttggacaccaagaatccaaggcagttc
tatatcggtgtgcttgacattgccgggtttgagatctttgattataacagcatggagcag
ctgtgcatcaacttcaccaatgagaaactgcaacagtttttcaaccacaccatgttcgtc
ctggagcaagaggagtacaagaaggagggaatcgtctgggccttcattgacttcggcatg
gacttggctgcctgcattgagcttattgagaagccattgggcatcttctccatccttgaa
gaggagtgcatgttccccaagtcttcagacactaccttcaaggacaagctgtacgcccag
catcttggcaaaacaaaggcgtttgagaagcccaagcctgccaaaggcaaggcagaggcc
cacttctccctggtgcactacgccggaactgtggactacaacatcactgggtggctggag
aagaacaaggatcccctgaacgactcagtttgtcagctgtaccagaagtctggagtcaaa
attctggctgctctgtatcctgctccaccacctgaggataaagccaagaaaggaggcaag
aagaagggtggttccatgcagactgtgtcctcccagttcagggagaacttacataagctg
atgaccaacttgaggagcactcatcctcattttgtgcgctgcctgatccccaacgagtca
aagactccaggtctgatggagaacttcctggttatccaccagctcaggtgtaatggtgta
ctggagggtatcaggatctgcagaaagggcttccccagcagaatcatctatgctgatttc
aagcagaggtacaaagtactgaatgccagtgtcatccctgagggccagttcatggacaac
aagaaggcttctgagaagctgcttgggtccattgatgtgaatcacgaggattacaagttt
ggacacaccaaggtgttcttcaaagcaggtctgctgggtgtcctggaggagatgagagat
gagaagctggcctctctggtcggcatggtccaggctctcagccgtggattcctcatgagg
agagagtttagcaagatgatggagaggagagaatcaatttacgccatccagtacaacatc
cgctcattcatgaatgtcaaaacctggccatggatgaagttgtacttcaagatcaagccc
ctgttgcagagcgctgagactgagaaggagctggccaacatgaaggagaactatgacaag
atgacggcagacctggccaaggctctggccacaaagaagcaaatggaggagaagttggtg
tccctgacgcaggagaagaacgacctggcgctccaagtagcatctgaaggagagagtctg
aacgatgctgaggaaaggtgcgaggggctcatcaagagcaagatccagcaggaggccaaa
ctcaaagagacgaccgagaggctggaggatgaggaggagatcaatgctgagttgactgcc
aagaagaggaagctggaggatgagtgctctgagctgaagaaggacattgatgacctggag
ctcaccctggccaaagtggagaaggagaagcacgccactgaaaacaaggttaaaaacctg
acagaggagatggcgtctatggatgagagtgttgccaagctgaccaaggagaagaaagcc
ctccaagaggcccaccagcagacactggatgacctgcaggcagaggaggacaaagtcaac
actctgaccaaggccaagaccaagctggaacagcaagtggacgaccttgagggttctctg
gagcaagagaagaagctccgtatggaccttgagagatccaagagaaagctggagggagat
ctgaaactggcccaggagtccataatggacctggagaatgacaagcaacaagctgatgag
aaaatcaagaagaaggagtttgagaccacccagctcctcagcaaggttgaggatgagcag
tctctgggagctcagctgcagaagaagatcaaggaactccaggcccgtattgaggagctg
gaggaggaaattgaggctgagcgtgctgccagggctaaggttgagaagcagagggccgat
ctctccagggaacttgaggagatcagcgagaggctggaggaggccggaggcgccactgct
gctcagattgagatgaacaagaagcgtgaggctgagttccagaagctgcgtcgtgatctt
gaagagtccaccctgcagcatgaggccacagccgccgctctgcgcaagaagcaggccgac
agtgtggctgagctcggggagcagatcgacaacctgcagcgcgtcaagcagaagctggag
aaggagaagagcgaatacaagatggagattgatgacctctccagcaacatggaggccgtc
gccaaggctaagggcaatctggagaagatgtgccgtactcttgaggaccagctgagcgag
ctcaagactaagaatgatgagaatgttcgccaggtcaacgacatcagcggacagagggcc
agactcctgacagaaaatggtgagtttggtcgccagctggaggagaaggaagcactggtg
tctcagctgaccagaggcaaacaggccttcacccagcaggtggaggagctaaagagggca
gttgaggaggaggtcaaggctaaaaacgcactggcccacggtgttcagtctgcccgccat
gactgtgacctcctgagggagcagtttgaggaggagcaggaggccaaggcagagctgcaa
cgcggcatgtccaaggccaacagtgaggtggctcagtggaggactaagtatgaaactgat
gccatccagcgcacagaggagctggaggaggccaagtga
DBGET
integrated database retrieval system
