Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423719
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Entry
139423719 CDS
T10872
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139423719
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139423719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139423719
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
139423719
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYCE1
Motif
Other DBs
NCBI-GeneID:
139423719
NCBI-ProteinID:
XP_071031433
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All DBs
Position
13:complement(4655352..4665954)
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AA seq
460 aa
AA seq
DB search
MASRCGQGRAAGSQRRRQESSDLQDTYLLHGEPSPPLSNLSLHASWWSGRDEHRETGPSL
GEQLVERNQHVARLQDALRREREKGSSLQCRCNQQGSELRRREQHSARLKERLTQLSERH
RERGASMELLNPVPRGQVKRDRPARTNGRKEEAALRVMLERREAEIREAMKLRHKLTTLL
HALRADMERTLLDTVGDQEEDPDSANMLVQSEESLGEHVTGGVVQGWKSVQRRLGDLLSQ
GHVAVGTDQDKLLAQLETELDQSQQLVKLQQHLLQDSVITPVPAALTDCYFLEEWERLQD
SWAELEHQRRSFHRERRAFTDAAIRLGHERREFEQQRACVVKQQYLFDSPLGRTLQRHNR
RESTVLNLSDSDHMILSGCRLATPSSAESGIIPWLGSSVSLQVHGKVKVHTPSTPELYSA
LQLPYSCRSSESDAQSECWDVGAERLQFAPPGPHLDGSFQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagatgtgggcagggacgggcagcagggtcccagaggagacgacaggagagc
tcagacctccaggacacatacctcctccatggggagcctagcccccctctcagtaacctg
tctctccatgcctcctggtggtctggcagggacgagcacagagagacagggccctccctt
ggggagcaactggttgagagaaatcagcacgttgccagactacaggatgcactgagacgc
gagagagagaagggttccagcctgcagtgtcggtgtaatcagcaggggtcagagttgagg
cgtagagagcagcacagcgccagactgaaggagagactaacccaactttcagagagacac
agagagagaggcgcctccatggagctgttgaacccggtgcccagaggtcaggtgaagagg
gacagaccagccaggaccaacggaaggaaggaggaggcagcgctacgtgtgatgctggag
cggcgagaggcggagataagggaggccatgaagctccgacacaaactcaccacgctactg
cacgcgctcagagcagacatggaacggaccctattggacactgtgggtgaccaggaagag
gacccagacagcgccaatatgctggtccagtcagaggagtccctgggcgaacatgtgaca
gggggtgtggtccagggatggaagagtgtgcagaggagactaggggacctcctgagtcag
ggtcacgtggctgtggggaccgaccaggataagctcttggcccagctagagacagagttg
gatcagagtcaacagttggtcaaactgcagcagcatctactacaggacagtgtgatcact
ccggtcccggccgctctgacagactgctacttcctggaagagtgggagcggcttcaggac
agctgggcggagctagaacaccagaggcggagcttccatagggagcgacgggccttcacc
gacgccgccatccgattgggccacgagagacgtgagtttgagcagcagagggcctgtgtg
gtgaagcagcagtatctgtttgactctccgttggggaggacgttgcagcgtcacaacagg
agagagagcaccgtccttaatctctcagattctgatcacatgatcttgtccggctgccgg
ctggccacgccctcctctgccgagtctgggatcataccctggttagggtcatcggtgtct
ctgcaggttcatggcaaagtcaaagttcacacgcccagcaccccagagctctactctgcc
ctccaactgccctacagctgcaggtccagtgagagtgatgcccagtcagagtgctgggat
gtgggggcagagaggctccagttcgccccccctggtcctcacctggacgggtcatttcag
tag
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