Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423830
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Entry
139423830 CDS
T10872
Name
(RefSeq) delta-like protein A
KO
K06051
delta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139423830
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Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
hEGF
EGF_TEN
DSL
EGF_DL_JAG
JAG1-like_EGF2
EGF_3
EGF_2
EGF_CA
cEGF
Motif
Other DBs
NCBI-GeneID:
139423830
NCBI-ProteinID:
XP_071031568
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Position
13:21670657..21675728
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AA seq
733 aa
AA seq
DB search
MGRAILLTVAVMFVLICKGFCSGVFELKLQEFLNKKGVQGNMNCCKGGLTSVYQQQCECK
TFFRICLKHYQPNASPEPPCNYGGAITPVLGSNSFQIPEAMSDSSFTNPIRINFGFTWPG
TFSLIIEALHTDSKDDLSIENPDRVISTMTTQRHLTVGDDWSQDLHTGGRTELKYSYRFV
CDEHYYGDGCSVFCRPRDDAFGHFTCGERGEIVCDAGWKGHYCTEPLCLPGCDDEHGFCE
KPGECKCRVGFKGRYCDECIRYPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPC
MNGATCSNTGQGSYTCSCRPGFTGDACEIEVNECTLNPCRNGGSCTDMENTHACACPPGF
YGNTCELSAMTCADGPCFNGGRCADNPDGGYFCQCPTGYAGFNCEKKIDHCTSSPCSNGA
RCVDLVNSYLCQCPDGFTGMNCDHTGNECSIYPCQNGGTCQEGLDGYTCICPPGYTGRNC
SSPISRCEHNPCHNSATCHERNNRYVCACVPGYGGRNCQFLLPDHAAIRGSEIPWMAVGS
GTALVLLLLAGCAVLVGCVRNKMQRGSQGGTTVGEGETINNLTNNCHRIDKDLSVSVVGL
GPQPGVKNINKKMDFGSDADMDGPSPSCRSSYKSRHLPADYNLVHEVKYEQAAKESMLSL
EASACEEKCHILDSGFEYEECRNKRSKHLKSDASETSRNEIKLPEMSACADTKYKSVFVM
SEEKDECIIATEV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgctattcttctgacagttgcggttatgttcgttttgatatgcaagggtttt
tgctcaggagttttcgaactgaagttgcaggagtttttgaacaagaaaggggttcagggc
aacatgaactgctgcaagggaggcttgacgtcagtttatcagcaacagtgtgaatgtaaa
acgtttttcagaatctgtctgaaacattatcagccaaacgcatcaccagagccaccttgt
aactacggcggcgctataacgcctgttcttgggtcaaactctttccaaattccggaagcc
atgtctgacagttcattcaccaatcccatcagaattaacttcggtttcacatggccgggg
acgttctcgctgatcattgaagctctgcacaccgactccaaagacgatctttcgatagaa
aacccagaccgtgttatcagcacaatgaccactcagagacatctgacggtgggagatgac
tggtctcaggacttgcatactggaggaagaaccgagttgaagtactcctaccgctttgtt
tgtgatgagcactactatggcgatggctgctcggtcttctgccgcccacgagacgatgcc
ttcggccacttcacctgtggagagcgcggagagattgtctgtgacgctgggtggaaaggc
cattactgcacagaacctctctgccttccaggatgtgacgacgaacacggcttctgtgag
aagcctggggagtgcaagtgcagagtgggtttcaaagggcggtactgtgatgagtgcatc
cgttacccaggctgcctccacgggacctgccagcagccgtggcagtgcaactgtcaggag
gggtggggaggcctcttctgtaaccaagatctgaactactgcactcaccacaagccctgt
atgaatggagccacttgtagcaacactggccaggggagctacacctgttcctgcagaccg
ggcttcactggggatgcttgtgagattgaggtcaacgaatgcaccctgaacccctgtcga
aatggaggaagctgcactgatatggagaacacacatgcctgtgcttgccctcctggtttc
tacggcaacacctgcgagctgagcgccatgacttgcgccgatggtccctgcttcaatgga
ggccgctgtgccgacaaccctgatggcggatacttctgccagtgccccactggctacgct
ggcttcaactgcgagaagaagattgaccactgcacctccagcccatgctccaatggtgcc
cgctgtgtggatctcgtcaattcctacctgtgccagtgtcctgatggcttcacaggcatg
aactgcgaccacaccggcaatgagtgctccatctatccctgccaaaatggtggtacatgc
caggagggtcttgacggctacacctgcatctgtcccccgggctacacaggccgcaactgc
agttctcccataagccgctgcgagcacaacccctgccacaacagcgccacctgccacgag
aggaataaccgctacgtgtgcgcctgcgtgcctggttacggtggccgcaactgccagttc
ctgctcccggaccatgcagctattcgaggctcggagatcccctggatggcggtggggtct
gggacagctctggtgctgcttctgctagcagggtgtgcagtgctggtgggctgcgtccgc
aacaagatgcagcgcggtagccagggcggcaccaccgtcggcgaaggcgagacaataaac
aacctgaccaataattgtcaccggattgataaggacctgtcggtaagcgtagtagggctc
gggccacagccaggcgtcaagaacatcaacaagaaaatggatttcggaagcgatgccgac
atggacggaccatcaccgtcgtgtcggagcagctacaagagccgccacctgccggcggac
tataaccttgtgcatgaggtgaagtacgagcaggcggccaaagagtcgatgctgagcctg
gaggcctcggcttgcgaagagaaatgccatattctggactcgggttttgagtatgaggag
tgcagaaataaacgcagcaaacatttaaaaagtgacgcatcagaaacttcaagaaatgaa
attaaacttccagaaatgtctgcatgtgcagacaccaagtacaaatccgtgtttgtcatg
tcagaggagaaggatgaatgtataattgcaactgaggtgtaa
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