Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423850
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Entry
139423850 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit-like isoform X1
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139423850
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139423850
04261 Adrenergic signaling in cardiomyocytes
139423850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139423850
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139423850
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
DUF4064
DUF716
TM225
RGS12_us1
Motif
Other DBs
NCBI-GeneID:
139423850
NCBI-ProteinID:
XP_071031590
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Position
13:24810042..24821637
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AA seq
293 aa
AA seq
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MTLCGRKVLTVLSSVFAVCALGLLGVAVSTDYWLYLEEGVILPLNQSTELRMSLHSGLWR
VCFTAATAAFKVFPSSKPGDEKGRCFTVQYVMPTNVQLTSESTVSVLKMIRSATPFPLVS
LFFLFIGFVLSNVGHIRPHRTILAFISGIFFILSGLSLVVGLVLYISSINDEMLNRTKTN
EAYFSYQYGWSFAFAAISFLLTETAGVMSVYLFMKRYTAEEMYRPHPGLYGPRHSNCSDY
SGQFLHPDTWNQRGRSPSSISSEASLQMNHSLHSNYPALLKCPEYDRMSSSPC
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtgtggcaggaaggtgttgacggtgctgagcagcgtgttcgctgtgtgcgcc
ctgggcctgctgggcgtcgctgtcagtactgactactggctctatctggaggagggcgtc
atcctgcccctcaaccagagtaccgagttacgcatgtccctgcactcgggcctctggagg
gtctgcttcacagctgcgacggcagctttcaaagtgtttccgagcagtaaaccaggtgat
gagaagggccgttgtttcaccgttcagtatgtgatgcccaccaacgtgcagctgacctct
gagtctacagttagtgtgctgaagatgatccgttcagccactcccttccccctggtgagt
ctcttcttcttgttcatcggttttgtcctgagtaacgtcggacacatccggccccaccgc
accatcctggccttcatctccggaatcttcttcatcctctcaggtctgtctctggtggtg
ggcctggtgttgtacatctccagtattaatgatgagatgttgaacaggaccaagaccaac
gaggcctacttcagctaccagtacggctggtccttcgcgttcgctgccatctccttcctg
ctcactgagacggccggcgtcatgtccgtctacctgttcatgaagcgctacacggccgag
gagatgtacagaccccacccgggcttatacgggccgcgccacagcaactgctccgactac
tctggtcagttcctccacccggacacctggaatcagcgcggccgcagcccctccagcatc
tccagcgaagcctcgctccagatgaaccactccctccactccaactacccagcgctcctc
aagtgtcccgagtacgaccgcatgtcctcctccccatgctga
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