Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423893
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Entry
139423893 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139423893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139423893
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139423893
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139423893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
139423893
NCBI-ProteinID:
XP_071031637
LinkDB
All DBs
Position
2:complement(20538004..20585604)
Genome browser
AA seq
2913 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGGGGGGSSSSVGGAGGGGVGGAVSGGGGGGSSG
RSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVI
IRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVII
DADAMFSEDISYFGYPSFRRSSLSRLGSSRERDSELLRERESVLRLRERRWLDGASFDTE
RGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAVSSKGELY
QWKWSEPEPYRNTQNPSIRHPRVSFLGLTNEKITLLSANSIRATVATETNKVATWMDDTL
SSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLESSLYWWGVVPFSQRKKMLEKARA
KNKKPKSSAGISSIPNITVGTQVFVSSLQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLES
VWNMNDSCRFQLRSPESLKNMDKTIKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIA
SSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPG
TSSSVSTQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKL
CIPEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERN
VAIFTAGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLGMGVHSLANLPTNS
TIKKKAAIIILAVEKQTLMQHVLRCDFDACRQYLVNLEQAVLLEQSPHVLHSFLGHRCDG
NRNILHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRT
GSSSSRGLRLREMMRRSLRAAGLGRHESGPSSDHQDPVSPPIAPPSWVPDPPPMDPDGDI
DFILAPAVGSLTTASTGTSQGPSTSTIPGPSSEPSVVESKDRKANAHLILKLMCDSMVLR
PHLRELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGMTEKVEADSVFME
MICPSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCH
KGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHIL
LFLVQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDW
NALKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDIT
FIDTLLGTLVKELQNKYTPGRREEAVVVTRRFLRSVARVFVILSVEMASSKKKNNFIPQP
IGKCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSV
EPLPPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVE
GVAGEEDHHEDQEEQGEENAEAEGQHDEHDEDEGDVLSSLGSDMELDLLAAAETESDSES
NHSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQET
FLLDEPLERTTTASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAAASSTGLIYI
DPSNLRRSSAISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNH
LVYSQYPAAVKLTYQDAVNLQNFVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGH
PSHPLHASQHSARRERMTAREEASLRTLEGRRSGRAATLLTVRQGMMSARGDFLNYALSL
MRSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDRKRSREILELG
LDNEDSEHENDEDTNQSSTLQDKEDDTVPAEMGQNHPFFRRSDSMTFLGCIPPNPFEVPL
AEAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSYTASKGLAEAALDRSCMEVNMGSSQI
LPTKMSYSANLKNVMSMETSQRGREDQPMDQELVAPKPGPSPHDLAAQLKSSLLAEIGLT
ESDGPPLPSFRPHCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFE
VKESKFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKV
TFKDEPGEGSGVARSFYTAIALAFLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSNLMQR
LRNRDRERERRSGGLRAGSRRDRDSSRLANVSSTNLDRGSRSTDSCVDMTTGSEFRTFKW
IMDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKITGML
LELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQQQENRK
RHGSTRSVVDMELDDPEDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLC
LLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEADAVFAAMD
LAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRKGLL
DVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGTKTLARIHKESQRENADK
LLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTAN
TCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacacttcgtggttcacccgttgcccgggactgaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggccaccttaaaacagtgtgtagttggaccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagcctgatcgtctggag
ctgaccaaaccagatggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggtggtggaggaggaggaggaggaggtggtggtggcagcagcagcagtgtaggaggt
gcagggggaggaggtgtaggaggagctgtcagtggaggtggtggtggaggctcctctggg
aggtcgtctacagctgccagggactcgagacgtcagaccagggtgatccgcacagggagg
gaccggggctctggtctcctgggcagccagccccagcctgtcatccctgcctcggtcatc
ccagaggaactcatctcccaggctcaggtggtccttcaggggaagtctaggagtgtgatc
atccgggagctccagaggaccaacctggatgtcaacctggccgtcaacaacctactgagc
agagacgatgaggacggtgacgatggcgatgacacagccagcgagtcctacctccctgga
gaggacctgatgtccctgctggacgctgacatccactcagcccaccccagtgtcatcatc
gatgctgacgccatgttctctgaggacatcagctactttggctacccctccttcagacgc
tcctccctgtcccgcctgggctcctcgcgagagcgtgactcagagctgttgcgtgagcgt
gagtctgtgttgaggttgcgggagcggaggtggctggatggggcctcgtttgacacggag
aggggctccaccagccgcgagggggagcccagcctggacaagaagaacatccccgtccag
agccctgtctctctgggcgaggagctgcagtggtggcctgacaaggatggtgtgaagttt
gtgagcatcgggtccttgttctctgagctggtggcagtgagctctaagggggaactctac
cagtggaagtggagtgaaccagaaccatacagaaacacacagaacccttctatccgccac
ccccgagtgtccttcctgggcctgaccaatgagaagatcaccctgctgtctgctaacagc
atcagagccaccgtggccacggagaccaataaggtggcgacctggatggatgacaccttg
agcagcgtggcgtccaagctggagcacagtgcccaggcctaccctgagctgcagggggag
cgcattgtgtctttgcactgctgtgccctctacacctgcgcccagttggagagcagcctg
tactggtggggtgttgtgccttttagtcaacggaaaaagatgcttgaaaaggctagagcc
aagaacaagaagccaaagtcgagtgccggcatctcctcaatacccaacatcaccgtggga
acgcaggtgtttgtgtcctctctccaggtgtgcctgaggaataaccccctctaccacgcc
ggtgccgttgccttttcggtcaacgctgggatccccaaggtgggactgctccttgagtct
gtctggaacatgaacgacagctgcaggttccagctgcgatcaccagagagcctcaagaac
atggacaagaccatcaagacacaggagatcaaaacggagagcaagccggagttggtaaag
actgagatgggcccccctccttccccggcctccacctgcagtgacacctcctccatcgct
agcagtgcctcgctgccctacaaacgaagacgctcgaccccggctcccaaagaggaggag
aaggtgaacgaggagcagtggcctcttcgggaagtggtgtttgtggaggatgttaaaaac
gtccctgtgggaaaggtgctgaaagtggacggtgcgtatgtagctgtgaagtttccaggg
acgtccagcagcgtgagcacacagccgagtcagactagtgctccagctcccatcactgac
tctgacccctcctcactgctgcaggactgtaggctgctcagaatagacgagttacaggta
gtaaaaactggtggaactcctaaagttccagattgcttccagcgtacacctaaaaaactc
tgcatcccagagaaggctgagattctggctgtgaatgttgactccaaaggagttcacgca
gtgctgaagactggtaactgggtgaggtactgtatctttgacctggccacaggcaaagca
gagcaggagaataacttccccaccagtaacctggccttcctggggcagagtgaacgcaat
gtagcgatcttcaccgcaggacaggactctccagtcatccttcgggatggaaacggcaca
atttacccaatggccaaagactgtatgggcgggatccgagaccctgagtggttggacctg
ccgcccatcgccagcctgggcatgggggtacactccttggccaacctccccaccaactca
accatcaagaagaaagctgctattatcatattagctgtggagaagcagacgttgatgcag
cacgtgctacgttgtgactttgatgcctgtcgtcagtacctggtcaacctggagcaggct
gttctcctggagcagagtccccacgttctccactccttcctgggccaccgctgcgacggc
aaccgcaacatcctccacgcctgcgtctccgtctgcttccccgtcagcaacaaggagacc
aaggaggaggaagaagctgaacggtctgagaggaatacgtttgcagagagactgtcagca
gtggaggccatcgccaacgcaatctccgtggtgtctagcaacagctctgggaacaggacg
ggctcttctagcagcagagggctgcgtctgagggagatgatgaggcgctctctgagagca
gcagggcttggccgtcacgagtctggcccctccagcgaccaccaggaccctgtgtcacca
cctatcgcccctcccagctgggtgcctgacccccctcccatggacccagatggtgacata
gacttcatcctggcccctgcagtgggatctctcaccacagcctcaacagggaccagccag
ggccccagcacctccactataccaggcccctcctccgagccttcggtggtggagtctaaa
gaccgcaaggccaacgcccacctcatcctcaaactgatgtgtgacagcatggttctcagg
ccacacctccgcgagctgctatccgccaaggatgcccgtggaatgaccccgttcatgctg
gcagtcagcgggagagcttacccagctgccattactgttctggaggctgctcagaaaatg
gccaaggtgggagaccccggcatgactgagaaggtggaagcagactctgtgttcatggag
atgatttgtccctcggggaccaaccctgacgactctcctctctacgtcctctgctgcaac
gacacctgcagcttcacctggacaggcgctgaacacatcaaccaggatatctttgagtgc
cggacctgcggcctgttggagtctctctgctgctgcactgagtgcgccagggtgtgtcac
aaaggacacgactgcaaactcaagaggacctctcccactgcatactgtgactgctgggag
aagtgtaagtgtaagacgctgatcgccggacagaaagctgctcgcctggacctgctgtac
agactgctcaccaccactaacctggtcaccagtccaaacagccgtggggagcatatcctt
ctgttcctggtgcagactgttgctaggcagagtgtggagcactgccagtaccggccccct
cgcatcagagaggacaggaaccgcaaggctgccaatgctgaagactctgacatgccggac
catgacctggaacctccacgcttcgcccagcttgccctggagagggtgctgcaggactgg
aatgctctcaagtccatgataatgttcggatcccaggagaataaagacccgttgagtgcc
agcagccgtatcgcccatctccttccggaggagcaggtgtacctgaaccagcagagtggc
accatccgcctggactgcttcacacactgcctcattgtcaagtgtgcccctgacattaca
tttattgacaccctgctggggaccttggtgaaggagctgcagaacaagtacactcctggc
cggagagaggaggccgtcgtcgtcaccaggaggttcctgcgctccgtggccagggtgttt
gtcatcctcagcgtcgagatggcttcgtccaaaaagaaaaataacttcatcccccagccc
attgggaagtgcaggcgtgtgttccaggccctgctgccctatgcggtggaggagctgtgc
aacgtggcggagtcgctcatcgtgcctgtgaggatggggatcgcccggcccactgccccc
ttcaccctggccagcaccagcatcgacgccgtgcagggcagcgaggaactcttctctgtg
gaacccttgccaccgagaccctccccagaccagtccagcaattctagtcagactgcatcg
tcctacatcatcaggaacccccagcctcgccgcagcagccagtcccagccggtcagaggg
cgagatgaggagcaggatgacattgtgtctgctgacgttgaagaggtagaggttgtcgag
ggtgttgccggggaggaggatcaccatgaagaccaagaggaacagggagaggagaacgct
gaggcagagggacagcatgatgaacatgatgaggatgagggggatgtcctttcctctcta
ggaagcgacatggagttggatctgctggctgctgcggagacggagagtgacagcgagagt
aaccatagcaaccaggacaatgcgagcggtcggaggagtgttgtcaccgcagcaactgcc
ggctccgaagcaggtgccagcagtgtccctgccttcttttcagaggacgactcccagtcc
aacgactcgagcgactcggacagcagcagcagccagagcgacgacgtggaccaggagacc
ttccttttggacgagcccttggagaggaccaccaccgcctcgcacgtcaacagtgctgcc
caggcgccacgctccatgcagtgggccgtacgcaacacccccagccagagagccacgggc
agcgccccctccagctcctccacccccgctgcagcgagctccacaggtctgatctacatc
gacccgtccaacctgcggcgcagcagtgccatcagcactagtgcggccgctgcggctgca
gctctggaggcctccaactcgtccagctacctgacgtcagcctccagcttagcccgggcc
tacagcatcgtcatcaggcagatctctgacctgatgagcctcatccccaagtacaaccat
ctggtctactcccagtaccctgctgcagtcaaactcacctaccaggacgctgtcaacctg
cagaactttgttgaggagaagctgatccctacgtggaactggatggtgtccatcatggac
tctacagaggctcagctgcgttacggctcggccctgtcctcagcaggtgaccccggacac
ccatcccaccccctccacgcctcgcagcactccgcccgcagggagcgtatgacagcccgc
gaggaagccagcctccgcaccttggagggacgcaggtctggacgtgctgccactctgctg
acagtgcgtcaagggatgatgtcagcacggggagacttcctgaactacgccctgtctctg
atgcgttcccataatgacgagcactctgacgttctgcctgtgctggatgtgtgttctctc
aaacacgtggcctacgtcttccaggccctcatctactggatcaaagccatgaaccagcag
acaactctggacacaacacagatggaccgcaagaggagccgagagattctggaactggga
ctggacaatgaagattctgaacatgagaatgatgaggacaccaatcaaagttccacgctc
caggataaggaggatgacacggtccctgctgagatgggacagaaccacccgttcttccgg
cgctctgactccatgaccttcttgggctgtatcccccccaaccccttcgaggtccccctg
gctgaggccatccccctggcagaccagcctcacctcttgcagcccaatgcaaggaaggag
gatctgtttggccgtcctagtcagggcctgtactcgtcctcgtacacagcaagcaaaggc
ctggccgaggccgccctggaccgcagctgcatggaggttaacatgggctcctctcagatc
ctacccactaagatgtcctactcagccaacttgaagaacgtgatgagtatggagactagt
cagcgcggccgagaggaccagcccatggaccaggagctagtggctccaaagccaggcccc
tcaccccacgacctagctgcccagctgaagagcagcctcctggctgaaataggtctcact
gagagtgatggccccccgctcccttcatttagaccccactgtagtttcatggggatggtg
atctcccatgacatgctgctgggccgctggcgtctgtctctggagctgttcgggcgcgtc
ttcatggaggatgttggagcagagcctggatcgattctgaccgagctggggggttttgag
gtgaaggagtctaagttccgccgggagatggagaagctccgtaacctccagtcccgtgac
ctggccctggaggtggaccgtgaccgtgaccagttgatccagcagaccatgaggcagctc
aacacccactttggacggcgctgcaccaccacacccatggctgtgcaccgcgtcaaggtc
accttcaaggacgaaccgggcgagggtagtggcgtggcccgtagcttctacacggccatc
gccctggccttcctgtccaatgacaagctgcccaacctggactgtgtgcagagcgtcagc
aagggcatgcaggccagcagtacgtgtcatcacgattacaactcaaatctgatgcagcgg
ctgaggaacagagaccgggagagggagcggaggagtggagggctccgagccggctctagg
agagaccgagacagctcccgtttggctaatgtctcttctaccaaccttgatcgcggttcc
cgcagcactgacagctgtgttgacatgacaactgggtcggagttccgaaccttcaaatgg
atcatggactcgaggagacagctgtccattgacacccggcccttcaggccagcctcggag
ggaaaccccagtgatgaacctgaccccctgcctgcccacagacaggccctgggagagagg
ctgtacccccgcgtccacgctatgcagccggcgtttgccagtaagatcactgggatgctg
ctggagctctccccagcccagctgctgttgctcctggccagtgaggactctctcagggcc
agggtggaggaggccatggagctgctcattgcacatggaagggaaaatggtgctgacagc
atactggacctgggtctcctggaggctcctgagaaagcacagcagcaggagaaccgtaag
cgtcatggctccacccgcagtgtggtggacatggagctggacgaccctgaagacggagac
gacaacgctcccctgttctaccagcccgggaagagaggcttctactctccccggcccggc
aagaacacggaggccaggctcaactgcttcaggaacatcggcagaatactagggctgtgt
ctgctgcagaatgagctctgtccaattactttgaacagacatgtcatcaaggtgctgctt
ggcagaaaggtgaactggcatgactttgccttctttgacccggtaatgtacgagagcctg
cggcagttgatccgtcactctcaggctggagaggcagacgctgtgtttgcagccatggac
ctggcctttgccatagacctgtgtaaggaggaaggggctggacaggtggagctgctgtca
ggtggggtcaacatgcctgtgactcctctcaacgtttacgaatatgtgagaaagtacgcc
gaacacaggatgcttgtggttgccgagcaacctcttcatgcaatgaggaagggtctgttg
gatgtccttcctaagaacgccctggaggacttgacagctgaggacttcaggctgctggtc
aatggctgtggagaggtcaacgtgcagatgctcatcagcttcacttccttcaatgatgaa
tctggtacaaagaccttggcccgtattcacaaagaatctcagagggaaaatgctgataag
ttgttgcagttcaaacgctggttttggtccattgtggagaagatgagcatgactgagagg
caagatctggtgtacttctggacctccagtccatctctgccagccagtgaggaaggcttc
cagcccatgccctccatcaccatcaggcctccggatgaccagcacctgcccacggccaac
acctgcatctcgcgtctctacgtgccactctactcctccaaacagattctaaaacagaaa
ctcttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
