Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139423914
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Entry
139423914 CDS
T10872
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like isoform X1
KO
K12652
TANK-binding kinase 1-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139423914
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Motif
Pfam:
TBD
Zn-C2H2_12
Seryl_tRNA_N
Fib_alpha
DUF3678
Lysozyme_like
PKcGMP_CC
CENP-F_leu_zip
Rad50_zn_hook
ADIP
NET2A_C
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
139423914
NCBI-ProteinID:
XP_071031656
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Position
13:35708151..35715053
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AA seq
622 aa
AA seq
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MESLFGGELGLLGGGEGLRDDGCGLGSGVNWSSSPIQDDMYPSHFTLAAAYHDIKTRLAS
LERENSSIKRKLKNYEVKFPMISEFEEERTLQCCSCEPKETSLLQSETTNLQQRVNSLTQ
ELQKSKEREERLEDVIQAYEKIHMEKSNVQRDLDKMTTLAEQHMERICGLESALRQREGS
LQKLSAQLHSKNIHYLQLHTSLDVPRERNGRGPTLQSSRSLDAVSDLKLQRLEAELEGAR
QQAQGACQREKAMKEELQRLQAEIRQLQQNVQRQEVTTPCEHCDMEWIKKAGDEQVNLAL
AYTELTEELVRVRGLAVKQTEILRKASHEQMVLRHSPAPQRRSPASQRPSPDRLHPSPPL
SPSSPPSGPASYSPTGLSYSPTGPASYSCRPTSQRLRARFQGRRSYSEVADSSAHQRPPP
RLLRDPVSTLPKPKNMGESGAYSRPPRISLVGLPRPASARGAVGAGGGGGGGGTSLSSSP
HHHALELGFPLAAEGRHFCHLKDPPAPTPQVTPPQSSDDEEWRCPSPVSSPPRTLGAMGV
SSREPPPCPSFLALKDPATLACHLPGYLNADHAQSWPSINLWMETEENDARSCPLCQLTF
PTGYPDDALIKHIDTHLENSKI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagtccctcttcgggggagagctgggcctcctgggcgggggcgaggggctgagggat
gacggctgcggcttggggtcgggggtcaactggtcgtcctcacccatccaagacgacatg
tacccctcccacttcaccctggccgccgcctaccatgacatcaagacgcgattggccagc
ctggagcgagagaacagcagcatcaagaggaagctgaagaactatgaggtcaagttccct
atgatcagtgagtttgaggaggagaggaccctacagtgctgctcctgtgaacccaaggag
accagcctactgcagtcagagaccaccaacctgcaacagagagtcaactccctcacacaa
gagctccagaagagtaaagagcgagaggagaggctggaggatgtgattcaggcctatgag
aagatccacatggagaagagtaacgttcagagagacctggacaagatgacaacactagca
gagcagcatatggagcgtatctgtggtctggagtcagctctgaggcagagggaggggtcc
ctgcagaaactcagtgctcagctgcacagcaagaacattcattacctacagctacacacc
agtctggacgtgcctcgcgagcggaacgggcggggtccgaccctgcagagctctcgtagt
ctggacgcggtgtccgacctgaagctgcagcggttggaggcggagctagaaggggcgcgg
cagcaggcccagggtgcgtgtcagagagagaaggcgatgaaggaggagctacagagactg
caggcagagatcagacagctgcagcagaatgtacagagacaggaggtgaccacaccctgt
gagcactgtgacatggaatggataaagaaggcaggagatgaacaggtgaacctggcgttg
gcctacactgagctgacagaggagctggtgcgtgtgcgaggtctggctgtcaaacagacg
gagatcctcaggaaggcatcccacgagcagatggtcctgagacactccccagccccccag
cgtcgctccccggcctcccaacgcccctccccagaccgcctccacccctctcctcccctc
tcaccttcctcacccccttctggccccgcatcctactccccaactggcctctcttactcc
cccaccggcccagcctcctactcctgccggccaaccagccaacggctacgtgcccgcttc
caggggcgccgcagctactcggaggtggccgactcgtctgcccaccagaggccccccccc
aggctgctccgtgacccagtctccaccctgcccaagcccaaaaacatgggggagtctggg
gcttattcccgcccgcccaggatttccctggtggggcttccccggccggcctcggcccgt
ggagctgtaggtgctggtggagggggaggaggtggtggcaccagcctgagcagtagcccc
caccaccatgctctggagctgggcttccctctagctgcagaggggcgtcacttctgtcat
ctgaaggatcccccggcccccaccccacaggtcaccccgccccagtcgtctgacgatgag
gagtggaggtgcccatccccggtctccagtcctcccaggacactgggggccatgggggta
agctcacgggaaccccctccctgcccttccttcttggccctaaaggacccggctaccctc
gcctgccacctgccagggtacctgaacgcagaccatgcccagtcctggccctccatcaat
ttgtggatggagacggaggagaacgacgcccggagctgccctctgtgtcagctgaccttc
cccactggttaccccgacgacgccctcatcaaacacatcgacacgcacctggagaacagc
aagatctaa
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