Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424046
Help
Entry
139424046 CDS
T10872
Name
(RefSeq) hexosaminidase D isoform X1
KO
K14459
hexosaminidase [EC:
3.2.1.52
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00511
Other glycan degradation
ocla00513
Various types of N-glycan biosynthesis
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
139424046
00511 Other glycan degradation
139424046
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
139424046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Motif
Other DBs
NCBI-GeneID:
139424046
NCBI-ProteinID:
XP_071031834
LinkDB
All DBs
Position
13:54378051..54396472
Genome browser
AA seq
569 aa
AA seq
DB search
MVTTRQALRAVVLCLVLVAAVKLLLSEYRTERKQKLATMDPGSFWHQGPKVKEAVTVHKS
EDINSLFNWAQKPEVPEPPVKKEAGTAPLETSKGPARIVHLDLKGAAPKVKYMKQIFPLF
SSLGAAGVLLEYEDMFPYHGNLTILRSPYAYSMEDIEEIKSLAKLNKLELIPLVQVFGHL
EFVLKHERYFHLREVRAFPNSLNPHHPGSVALVKDMVSQVMDCHPDARWFHMGADEVRGL
GESQDSKNWLHSNKGDVGKMFLNHAVSLARFITERRSGVRVILWDDMLRKISPATIKESG
LQDLASPTIWNYLKKMDTDGIGTLISRYHEAGFKGIWFASAFKGGTGIDQRWTPLDYQLQ
NHLSWIKVMNSMTKYHSITLHGILLTGWQRFEHHTVLCELLPVGIPSLAMCLQSLKHGAF
DENAKMEAHHILGCNIKVEKDICEGSGAFSGSQIYHMVFYIHTNLQKEVEALMKHYHIKG
GFSRYHRKYNFANPRIIGFFQGRLKKLLDKWETYIENFRMEMEAIYFPDTVEEWMEENVN
ANMDLLRENARDAERILKLNGQPKSLKTL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaacaaggcaggccctcagagctgttgtactttgtctggtgcttgttgctgct
gtcaaacttctgctttcggaatacagaactgaaaggaaacagaagttggccaccatggat
cctggctcattttggcatcaggggccaaaggtgaaggaggctgttactgtacacaagtca
gaggatataaactctttgtttaactgggcccagaaaccagaggttccagagcctccagta
aaaaaagaagcaggcacagcacctctggaaaccagcaaaggccctgcaagaatagtgcac
ctggatctgaaaggtgctgcacccaaagtcaaatacatgaagcagatcttcccgctcttc
tcctctctgggtgctgctggtgttctgctagagtacgaggacatgtttccctatcatgga
aacctgacgattctcaggtcaccgtatgcctacagtatggaagatatagaggagataaag
agcctagccaaactcaacaagctggaactgattcctttagtgcaagtgtttggacacctc
gagtttgtgttgaagcatgagaggtatttccacctgagggaggtgagggctttccctaac
agtctgaacccccaccaccctggctctgtggctctggtcaaggacatggtctcccaggtc
atggactgtcaccctgatgcacgctggttccacatgggggctgatgaggtaaggggtctg
ggagagagccaggactctaaaaactggttacatagcaataagggtgatgttgggaaaatg
ttcctgaaccatgcagtgtcattggcccgtttcatcacagagagaaggtcaggggtcaga
gtgattctgtgggatgacatgttgaggaagatcagccctgccactattaaagagtcaggc
ctgcaggatcttgcttccccaacaatatggaactatttgaagaaaatggatacagatggt
attggaacattgatatctagataccatgaggccggtttcaagggtatatggttcgccagt
gcatttaaagggggcacaggtattgaccagcgatggacccctcttgactatcagctacag
aaccatctgtcctggataaaggtcatgaactctatgaccaaataccactccataaccctc
catggcatcctgctaacaggatggcagaggtttgagcatcataccgtgttgtgtgaactc
ctcccagttggcattccctccctggctatgtgtctacagagcttaaagcatggtgcattt
gatgaaaatgcaaagatggaggctcaccacatactgggctgcaacatcaaggtggagaaa
gatatctgtgaggggagtggagccttctcaggctctcagatctaccacatggtgttttac
attcacacaaacctgcagaaggaggtggaggccctcatgaaacactaccacatcaaaggg
ggtttcagtcgctaccacagaaaatataattttgcaaatccaagaattataggattcttc
caaggtcggctgaagaaactgttggataagtgggagacgtacatagagaacttccgtatg
gagatggaggctatctacttcccagacacagtggaggagtggatggaggagaatgtcaac
gccaacatggatctactgagagagaacgcccgggatgccgagcgaatcctaaaactgaac
ggacagcccaagtcactgaagaccttatag
DBGET
integrated database retrieval system
