Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424077
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Entry
139424077 CDS
T10872
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139424077
03037 Cilium and associated proteins [BR:
ocla03037
]
139424077
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139424077
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139424077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
139424077
NCBI-ProteinID:
XP_071031873
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All DBs
Position
13:complement(58262060..58293328)
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AA seq
817 aa
AA seq
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MAYSVDFNLRPIMELELESLRGDDTAQDSMTGTGLESGSPETLEMEVLTTEGRDRLASQM
SDVRERADERSEESIQTNLLVRKSWSTATLRVLSSMPSRSIGQQSRLEIISQCNIRSTQL
RRYHRQTQDVSLSSRPSIRGYGIEADSEDVCEEETKRQELVNNLQSLSAGDRVRMLRATP
LSLAEKTKLRKLVFSDKVGQSLLSSQVPCCSFLKRALYHIWFGCLFILSSLQLWQVALKR
LGGRFGTGVLSYFLFIRTLLLFNVFLFLINGLFLVLPQAIHPPLHTPSSHRVTGLELFTG
TGYLSNSLMFYGYYTNSTINTSCRPDEATAGTGCGTTSDPHMMAYNIPLAYCFTIGITFF
ITGIVLVYSMSKSFERSFRVFKSQGNMAIKVFCSWDFKVSKKMSVRLQSENITTQLKELL
SEVKGGEEEKGRLSGMAVHLLAWSISLGSTFFCALGIHCFAKYMHLRRLEHAEGEVSVVH
EARLLALPGVVSCGNLLLPGLFNLVSWMENFNSPIVRLYVSIFRNLLLKVSILGVLCYHW
LGKIAAEPEQHGLQCWESFVGQELYRFLLVDFIFTVLYTVFGEFIWKRFSQGVLRRRRKP
VFDIARNVLELIYGQTLTWLGLLFTPLLPAVQILKLLLLFHMKKSSLLVNCQASRKPWRA
SQMSTLFISLLCFPSFLGATVSVTYTIWTIKPSSGCGPFRNLPFMFHSGKQWAQELKSTN
HKLAWLNWVHSCLVENPLFLFLLAGVFLMVIYIHTQVLDGQRKIISLLQEQIENEGKDKK
FLITSLQAIHEKRKYPLSPSSRPQPQGSEVEYVLVED
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtggacttcaatctgagacctataatggagcttgaattagagagtctt
aggggtgatgatacggcccaggactctatgacgggaacaggtctggagagtggcagtcct
gaaaccctggaaatggaggtccttacaacagaaggcagagataggctggccagccagatg
agtgatgtcagagagcgggcagatgagaggagtgaggaatccatacagaccaaccttctg
gtcaggaagagctggtctaccgccaccctgagggtcctgtcctccatgcccagtcgcagc
atcgggcagcagagtcgtcttgaaatcatctcccagtgcaacatccgttctactcagctg
cgcaggtaccaccgccagacccaagacgtttccctctcctccagacctagtatccgtggc
tatgggatcgaggcagactctgaggatgtctgtgaggaagagaccaagagacaggagctg
gtcaacaatcttcagagtctgtcggccggtgaccgtgtgcgtatgctgcgtgccacgccc
cttagtctggctgagaagactaaactgaggaaacttgtattcagtgacaaagttggacag
tccctcttgagcagccaggttccctgctgtagcttccttaagcgagctttgtatcacatc
tggttcggatgtctcttcatcctcagttccctgcagttgtggcaggtggctttgaagagg
ctgggtggccgctttggcactggtgtgctctcctactttctcttcatcaggactcttctg
ctcttcaacgtctttctcttcctcatcaacggcctgttcctggtcctcccccaggccatc
cacccgccccttcacacccccagctcccacagagtcacaggcctggagctgttcaccggc
acgggttatctctccaactctctaatgttttatggctactacaccaactccaccatcaac
accagttgtagacctgatgaagccaccgccgggactggctgcggcaccaccagtgaccct
cacatgatggcctacaacattcccttagcctactgcttcaccatcggcataacattcttt
atcaccggcatcgtcctcgtttacagcatgtccaagtcctttgagaggagtttccgtgtg
ttcaagtctcagggaaacatggccataaaggtcttctgctcctgggatttcaaagtcagc
aagaagatgtctgtcaggctgcagtcggagaacatcaccacccagctcaaggagctgttg
tcggaggtgaaaggcggagaggaggagaagggcaggctgtctgggatggcggtgcacctg
ctagcatggagcatttctctggggagcaccttcttctgtgcactcggcatccactgcttt
gccaagtacatgcacctgaggagacttgagcatgcagagggggaggtcagtgtggtgcat
gaggctcgtctgctggctctgcctggggttgtgtcctgtgggaacctcctcctccctggt
ctcttcaacctcgtgtcttggatggagaacttcaactcgcccattgtacgtctctatgtt
tccatcttcaggaacctactgctgaaggtgagcattcttggcgtactgtgctaccattgg
ctggggaaaattgcagctgaaccagagcaacatggtctgcagtgctgggagagctttgtt
ggtcaggagctgtatcgtttcctgctcgtggatttcatattcacggttctctacacagtc
ttcggagaatttatttggaagcggttttctcaaggagtgctgaggagaaggaggaagcca
gtgtttgatatcgcccgtaacgtactcgagctcatctatgggcaaaccctcacctggcta
ggcttgctcttcactcctttactgccagctgtgcagatcctcaagctgttgttgttgttc
catatgaaaaagagcagtctactggtgaactgccaggcatccaggaagccgtggagagcc
agtcagatgagcaccctcttcatctctctgctgtgtttcccctctttcctcggggccacc
gtgtctgtgacctacaccatatggacgattaagccctcctctggctgtggtcctttcagg
aacctccccttcatgttccactcgggcaaacagtgggcccaggagctgaagagtaccaac
cacaagctggcctggctcaactgggtacacagctgcttggtggagaaccccctcttcctg
ttcctgttggcaggtgtctttctaatggtcatttacattcacacccaagttttagacggc
caaaggaaaataatcagtctgctacaggagcaaatagaaaatgaggggaaggacaagaag
ttcttaattactagtctgcaggccatccatgagaagaggaagtatccactgtccccttcc
tccaggcctcagccacagggcagtgaggttgaatatgttttagtggaagattaa
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