Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424131
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Entry
139424131 CDS
T10872
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139424131
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139424131
04090 CD molecules [BR:
ocla04090
]
139424131
04091 Lectins [BR:
ocla04091
]
139424131
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SIGLEC family
139424131
CD molecules [BR:
ocla04090
]
Proteins
139424131
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139424131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_5
Ig_4
V-set
V-set_CD47
ICAM_N
HIG_1_N
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
139424131
NCBI-ProteinID:
XP_071031929
LinkDB
All DBs
Position
13:10468266..10469690
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AA seq
290 aa
AA seq
DB search
MDPTSVSERENVTLTCRTNCTLDPITVYSWFKNGQSIPNSNTSSPVYILFSVSSEDTGRY
SCAVEGHEDLPSAEETLTVRYGPKDTSVSVSPSGEIVEGSSVNLTCSSDANPPVENYTWY
KRNVTSPKASGQSYTIHNVSSEDREGYYCEALNIIGRETIPVHINVISVFSWVPVVGVGA
VLTAGALLVTIYCYMKRRSTGGSDTTADTLIQGLPCDTAPQIDAEPSDYGNWSEPPKNLE
SDTDPQIDVEPSDYENWSEPPKILESDTYPQIDAEPSDYENWSEPPQNLD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatcctacatctgtgtcagagagggagaatgtcacactgacatgtagaaccaactgt
acactggaccccatcacagtctacagttggtttaagaatggacagtctataccaaacagc
aacacctcctctcctgtctatatcctattctcagtcagcagtgaggatacaggcagatac
tcctgtgctgtagaaggacatgaggatctcccctctgctgaagagactctcactgtcaga
tatggcccaaaggacacctcagtgtcagtcagtccctctggtgaaatagtggagggcagt
tcagtgaatctgacctgcagcagtgatgccaacccacctgtggaaaactacacctggtac
aagaggaatgtaacctcaccaaaagcatcaggacagagttacaccatccataacgtcagc
tctgaggacagagagggatactactgtgaggctctgaacattatagggagagagactatc
cctgtccatattaatgttatatcagtgttttcctgggttcctgtggtgggggtgggggct
gtcctgactgctggagctcttcttgtcaccatctactgctatatgaagaggagatccaca
ggaggaagtgataccacagcagacacactgattcagggactcccctgtgacacagcccct
cagatagatgctgagccctccgattatgggaactggagcgaaccaccaaagaacctggaa
agtgacacagaccctcagatagatgttgagccctccgattatgagaactggagcgaacca
ccaaagatcctggaaagtgacacatatcctcagatagatgctgagccctccgattatgag
aactggagcgaaccaccacagaacctggactga
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