Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424224
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Entry
139424224 CDS
T10872
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139424224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139424224
04090 CD molecules [BR:
ocla04090
]
139424224
04091 Lectins [BR:
ocla04091
]
139424224
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SIGLEC family
139424224
CD molecules [BR:
ocla04090
]
Proteins
139424224
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139424224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
V-set
Ig_CD22
Ig_5
Ig_4
Caenor_Her-1
DUF4193
RIFIN
Ctr
DUF3377
Motif
Other DBs
NCBI-GeneID:
139424224
NCBI-ProteinID:
XP_071032004
LinkDB
All DBs
Position
13:complement(9334008..9338132)
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AA seq
855 aa
AA seq
DB search
GLQVKVTGGHQDKTLTCSTTCTLTDNPTYIWYKNGQHRDESTSPQYKYSVSSNYDASYSC
AVKGHEDLHSPAVCVPGQSCNRVTYTKRIICVLKGSTVDISCTYVGYYSTTSSFWFRSDT
LTPEDLTTDPGYAGRVKYPDKETRRNEGPFTLRITDLREEDSAEYRFTFKANNFEWGHSF
PGTTLSVTGLQVKVTPAAEGQKTLTCITTCTLTDNPIYIWYKNGQHLDESTSPQYKDSVS
NDYEDSYSCAVKGHENLHSPAVCVVGESCMNVTYTHQSICALKGSTVDISCFYTHPSWHN
VTEVSWFSKWESGVTKDLSLNPEYADRVEYHRQTEKDSTLRITDLRESDSTEYKFRFTTD
EARWGYSFPGTTLSVTGFQVKVTPKRRSELNTLSCITTCTLSNPNPIYIWYKNGQNLDES
TSPQYKDPVSSNYDDSYSCAVKGHENLHSPAVCVQGQSCNRVTYTKRRICVLKGSTVDIS
CTYVGYYSTTSTFWLRSDKSTPEDLTRDPGYAGRVEYTGTYRGPFTLRITDLREEDSAEY
RFTFKTDYFDWGHSFPGTTLSVTGLQVKVTPAAEGQKTLTCITTCTLTDNPTYIWYKNGQ
RLDEPTSQQYSSNILVVLGHSADSYSCTVEHHEDLHSPAVYAPKNTSVSVSPSGEIVEGS
SVTLTCSSDANPPVDKYTWYKKNVTSPKASGQSYSITNIISEDRGEYYCEAQNGRGSNNS
TALMIIVAGKQTSVQTAAVGIIVVVLVLILCFSGLMYFRKKASKPTNTRDTADDGQGDSS
PVYDNISSVAMTSTAAQTADTDNQDDVHYASVHFSGSKNQEVHLNSTVQVPQPQKEDEDV
QYAAVKFNLPTAATR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
ggtcttcaggtgaaggtgactggtggacatcaggataagacactgacctgtagcaccacc
tgtactctgactgacaaccccacctacatctggtacaagaacggacaacatcgagatgag
agcacctccccccagtacaaatactcagtctccagtaactatgatgccagttactcctgt
gctgtaaaaggccatgaggaccttcactctcctgcagtgtgtgttccgggtcagagctgc
aacagagtgacttacaccaagagaataatctgtgtcttgaaggggtcaacagtggacata
tcctgtacttatgttggttattattccaccacatcatcattctggtttagaagtgatacg
ttgacccctgaagacctaaccacagacccagggtatgcaggtcgtgtgaagtaccctgac
aaagagacaaggagaaacgaaggtcccttcaccctgagaatcacagatctgagagaggag
gactcagctgagtatcgcttcacttttaaagcaaacaactttgaatggggtcatagtttc
ccaggaacaactctgtctgtcacaggtctgcaggtgaaggtgactcctgctgcagaggga
cagaagacactgacctgtatcaccacctgtactctgactgacaaccccatctacatctgg
tacaagaacggacaacatctagatgagagcacctccccccagtacaaagactcagtctcc
aatgactatgaagacagttactcctgtgctgtaaaaggccatgagaatctccactctcct
gcagtgtgtgttgtgggtgagagctgtatgaatgtgacttacacccatcagagtatctgt
gctttgaaagggtcaacagtggacatatcctgtttttacacacatcccagttggcataac
gtcacagaagtgtcctggttcagcaaatgggagtctggtgtcactaaagacctgagcctg
aacccagagtatgcagatcgtgtggaatatcatcgacaaacagaaaaggactccaccctg
agaatcacagacctgagagagagtgactcaactgagtacaagttcagatttacaactgat
gaggcaagatgggggtacagcttccctggaacaactctgtctgtcacaggttttcaggtg
aaggtgactcctaaaaggagatcagagttgaatacactgtcctgtatcaccacctgtact
ctgagtaaccccaaccccatctatatctggtacaagaacggacaaaatctagatgagagc
acctccccccagtacaaagacccagtctccagtaactatgacgatagttactcctgtgct
gtaaaaggccatgagaatctccactctcctgcagtgtgtgttcagggtcagagctgcaac
agagtgacttacaccaagaggagaatctgtgtcttgaaggggtcaacagtggacatatcc
tgtacttatgttggttattattccaccacatcaacattctggcttagaagtgataagtcg
acccctgaagacctaaccagagacccagggtatgcaggtcgtgtggagtacactggaaca
tacagaggtcccttcactctgagaatcacagatctgagagaggaggactcagctgagtat
cgcttcacttttaaaacagactactttgactggggtcatagtttcccaggaacaactctg
tctgtcacaggtctgcaggtgaaggtgactcctgctgcagagggacagaagacactgacc
tgtatcaccacctgtactctgactgacaaccccacctacatctggtacaagaacggacaa
cgtctagatgagcccacttcccaacaatactctagtaatatcctagtagtgttgggtcat
tctgcagacagttactcctgtactgtagaacaccatgaggacctccactctcctgcagtg
tatgctccaaagaacacctcagtgtcagtcagtccctctggtgaaatagtggagggcagt
tcagtgactctgacctgcagcagtgatgccaacccacctgtggacaaatacacctggtac
aagaagaacgtaacctcaccaaaagcatcaggacagagttacagcatcactaacatcatc
tctgaggacagaggagaatattactgtgaggcccagaatggaagaggatctaataactct
acagctctgatgatcattgtagcagggaaacaaacctcagttcagactgcagctgtagga
atcatagtggttgttctggttctcatcctctgtttctctggactcatgtatttcaggaag
aaggcctccaaacccaccaacacaagagacacagcagatgatggacagggagactctagt
ccagtgtatgacaacatctcaagcgtggccatgacctctactgcagcacagacagctgac
acagacaaccaggatgatgttcactacgccagtgtccacttctctggctccaaaaaccag
gaagtgcatctaaactccaccgtccaagtgcctcagccccagaaagaggatgaggatgtc
cagtacgctgctgtgaaattcaacctccccactgctgccacccggtga
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