Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424241
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Entry
139424241 CDS
T10872
Name
(RefSeq) somatostatin receptor type 5-like
KO
K04219
somatostatin receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139424241
04081 Hormone signaling
139424241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139424241
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Peptide
Somatostatin
139424241
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7TM_GPCR_Srw
HTH_Tnp_Tc3_2
TAS2R
Motif
Other DBs
NCBI-GeneID:
139424241
NCBI-ProteinID:
XP_071032022
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Position
13:complement(11687975..11706024)
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AA seq
546 aa
AA seq
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MVTLTELQSSSVKMGEPSRRTTISAALYQSGLYDRSSTEVNLNPPTHYTTTNNMTIYLPT
AAPSMPEPNTFPPSPLFLLAPDPFFNGSYHNWTNTGGGGVGGFQLTIAGVLIPLIYVAVC
VIGLVGNTLVIYIVLHYVRTESVTNIYILNLAIADELFMLGLPFLAVQNALLSWPFGSLM
CRVVMTVDAINQFTAIFCLTVMSIDRYLAVVHPIRSSWWRRPHVAKAVNAAVWAVSFVVV
LPVVVFADVLEDDGNCSIVWPEPAEVWKATFIVYTCTVGFFGPLLVICLCYLLIVIKVRN
AGKRARSTSSRRRKSERKITRMVVVVVAVFVLCWLPFYILNIVNLLILLPGEFRGLYYFV
VVLSYANSCANPIIYGFLSDNFKRGFRKALCRSSRRVENHERAAATELQRPAELWRGIAP
EPRDGLGVTKSHEGGEEEVEEEEENGIEMERREDATQMRENCRIAQNGNGGGQVESSRIL
FTPGGNVETVPLGQRAKAGEEAGKGPGLELGPTVAFSTLANGSKSESNRSRPETVEKSPK
LEISYL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggtcactctgacagagctccagagttcgtctgtgaagatgggggaaccttccagaagg
acaaccatctctgcagcactctaccaatcaggcctttatgacaggtccagcactgaggtc
aacctcaacccacccacccattataccacaaccaacaacatgaccatctacctccccaca
gccgccccctcaatgcctgagccaaacaccttccccccctcccctctcttcctcctcgcc
cccgaccctttcttcaatggatcctaccacaactggaccaacactggcggcggaggcgtg
gggggtttccaactcactatagcaggggtccttatccccctcatctatgtagcagtctgt
gtgatcggcctggtgggcaacacattggtcatctacattgttttacactatgtgaggacg
gagtcggtcactaacatctatatactcaacctggccatcgctgatgagctattcatgcta
ggcctccccttcctggcggtccagaacgctctgctctcctggccgtttggttctctcatg
tgccgtgtggtcatgactgtggacgccatcaaccagttcaccgccatcttctgtctcacg
gtcatgtccatcgaccgctacctcgcagtggtccatcccatacggtcgtcgtggtggagg
cgaccgcacgtggccaaggcggtgaatgcggcggtgtgggcagtgtcgtttgtggtggtg
ctgcccgtggtggtgtttgcggacgtactggaggatgatgggaactgtagtatagtgtgg
cctgagccagccgaggtctggaaggcaacgttcatcgtgtacacgtgcacggtcgggttc
ttcggaccgctactcgtcatctgtctctgctacctgctcattgtgatcaaggtgcgcaac
gcggggaaacgggcccggtccacctcctcccgacgcaggaagtccgaacgcaagatcacc
cgcatggtggttgtcgtggtagcagtgttcgtgttgtgctggctcccattctacatcctc
aacatcgttaacctgctaatcctgttaccgggcgaattccgggggctgtactactttgtg
gtggtcctatcgtacgctaatagctgcgctaacccaataatttacggattcctgtccgat
aattttaagagagggttccggaaggctctttgtcgttcttcgaggagggtggagaaccac
gagagagcggcagccaccgagctgcagcgccctgcagagctctggaggggaattgcgccc
gagccgcgagatggcctgggggtcaccaagtctcatgaaggaggggaggaagaagtggag
gaggaagaggagaacgggatagagatggagagaagagaagatgccactcagatgagagag
aactgcaggattgcacagaacgggaacggaggaggacaagttgagagctccaggatcttg
ttcactccggggggaaatgtggagacggtacccctggggcagagggctaaagctggggag
gaggctgggaaaggcccaggcttagaattggggcctactgtcgctttctccactcttgcc
aatggatcaaagagtgaaagtaacaggtcacgtccagagacagtggagaagagccccaag
ctagagatcagctacctgtaa
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