KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424287
Entry
139424287         CDS       T10872                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1-like
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139424287
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    139424287
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 139424287
NCBI-ProteinID: XP_071032087
LinkDB
Position
2:21595042..21610222
AA seq 2324 aa
MEATQLIDDSILEESEEEDDGEKRGEPLAKLRVLKNKHITETELPLYQGENVLGRNPDSC
SLPLVARSVSKQHTIISISMFHGNRRHGNVAAMETEALVWDLGSMNGTRKGRTKLTPHVR
YALTEGECVVIADIPCQYVSVDQRGGQGHMQNPTNAHSGRRSRPDRKAQLRGSPSGQGLG
RETGTPKTEGRGVNGEIGAPSLTELGGKGKNLAKPLSFELTPTQPERTLVPESDSDGEQE
GQRDKRGKYFVSDSDSHMSSPTCSTFLSPTTNVIPESEDESLITPSSSSAKNRPKKIVSF
SEEESDMDGPRQQPRRRRAQVIVDDSEEEEEGKEGTEALGEKETGKRTRGKEDVSVVNQV
SQAERDRLTPSAPMVSTEDTFNMDSDTDVEGEEEMGLSAPVNAVKPPAATEPPTTDSDPG
QIHMDSDTDVEEGDTMDSDSKLMLTAADVERKPVDSVPVVQPTEIHLDSDTDVDDDDDVV
VSDSATNVTSFVSDPAEKPDNPAPAVPPVEFHLDTDTDVEEEDTDTHSKTVPESDSSGIR
TGIAGHQEILLDSDTDEEDNPFTPPASSRTAELLNPPTSVGPAAAAPLEIRSDSDTDLEE
DAIQTMNLPPPNVTTVTEDAVFASRQAVLPSPTITTTTGAVTKTIALRSQDSDADTDAEE
ERLEPKPPRCRPPAGMVPESDLSEPSDFRMDSDTEEDGPGEAGQGQTACLLREGAAGPGL
LPLGGSSGPHQKCSTPLASSVQEEMETQAFFCPSDPFRRPALPPVLRPIAALSCSASDSQ
EDDDFVVAETQSFVLEAQNQGHQSSLPVEPTLDATQPYGLEPSLGEEQPSRGSFQLGLSD
SSHLHLQARDQASESTQAFSFPGGDSDLEATQTYGSGGGSEEPSLGQRSAVFRRNRQGDS
DLEATQTYGSRGGSEEPGLGQRSAVFERNRQVDFALEATQAYAAQPRSDTEEEDEEETPT
TSNVATTETLPMSAYEEEDSEEEEDLVGAKPLIPVRRGRSGGARERDEEEQETQTGEVLT
NQYLSTAQTLDMVQESDDEEEAKPDSPRRRRTQKQTVDEEERQTVGSYLSTAETQPMFTA
AAAEDDDDNEEEELKPPSPRRRGRSQRGRVEEEETQPSEFLTSSHISTAETQPMGTCDTE
EEEEEDTKAKGQAQRERGKESEAGTSGVSSRGRRGARGGEEESSETLKTQMRGKGKAVNT
AGGGGRREVLPEEEESEKEEEAEVVEQGRRGIGRKSVKQQKEGEKERLEEERREEEEGIE
KERQEQAEKERLQKEKVESERVMKEQQDRERMEQELKEQDERLESVEREKTERMEREKRE
ETERMEREKREQEKREETERMEREKREETERMEREKREQEKREETERMEREKREQEKREQ
EKREETERMEREKREETERMEREKREQEKREETERMEREKREETERMEREKREQEKREET
ERMEREKREETERMEREKREQEKREETERMEREKREQEKREETERMEREKREQEKRERLE
RERKEREEQERLQCERTKREKKERLEEEKERIERERKEIEERNRLEREEKEKQERLEREN
REREALERSERERVEKERIEGEQAEKQRLEKEKMEREEKRKQERELLKKKKEEERNLKEK
LEREKKEREKREAEEKEKEIKERQAKEQGEKQAKKDDENELKTSRRGRRAATRRTVTVPP
TTEPQPELNILSSTPEPVPASITRSRSNSSNSVSSERSSIDTLGSRGRGGRKTTSTTEPA
PDPDNPTRNSTRRRTLVGTVVAPPAAVEVTAQDILSSEQFVARRTRSSSTNSHSSTNSEV
STCIVDSVSSQSKGRGGGRRRKTGTESLSPSNRQSEQPPAPKPTARGRRSQKVEDDGPHP
VINEKADSQEAGGTTRGQNKTAKTNEPDPVVADEETTPAQVTEDSPAPRGNGRGRGRAGQ
KDNTPESTTTTAGGDTPSEEGLESKTGGRGKGRKRGLEEEEEEENSGFKVPRRKAKVQRG
GRCRAAEEKGEKEEKPASTPAKRGRASTAQVKKIAEEEKSMAGQSEKMEEEEASAVQRKV
RGRQSTVQIKKKEEPVLDSVVPQTPTGKGRGKRRAPVESSPLARTPRSSSASPLSSLSSP
GTLGPARAATHSYKVLFTGVVDEEGGKVVSCLGGSLAKGVADMTHLVTDRVRRTVKFLCA
VARGMPVVTTAWLDKCGKVGHFLPTDRYLVKDREQENKFSFCLEESLRTASTQPLLQGYE
VHVTRSVLPEPAQMKDIIICSGARFLSTMPSTQKAQARTLVISCGEDWSLCAPALSASLP
VLSAEFLLTGILQQRVDLVTHVLSAPKPRAQPGAKGQARGRKRM
NT seq 6975 nt   +upstreamnt  +downstreamnt
atggaggcaacacagctgatcgatgactcaatattggaagagtcagaggaggaggatgat
ggagagaagcgaggagagccactggccaaactcagggtgttaaaaaataaacacatcaca
gagactgagttgcctctctaccagggagaaaatgtgttgggtcgaaacccagactcctgc
tccctgccccttgtggcccgctccgtatccaagcaacacaccatcatctccatctcaatg
tttcacggcaaccgtcgtcatggcaacgttgccgccatggagacagaggctttagtgtgg
gacctgggcagcatgaacgggacaaggaagggccggaccaaactgacccctcacgtccgc
tacgctctgaccgagggagagtgtgtggtaatagctgacatcccctgccagtatgtctct
gtggaccagagggggggacaggggcacatgcagaacccgacaaacgcacactctggaagg
aggtccaggccagacaggaaggcccagctcagaggaagccctagcggccaaggtctggga
cgagagactggcacaccgaagactgagggtagaggagttaatggagagatcggggcaccg
tcgttgactgagctgggtggaaagggtaaaaatctggccaaacccctgtcatttgaacta
acccccacacagcctgagaggacactggtgcctgagtctgactccgatggagagcaagag
ggacagagagacaaacggggaaagtactttgtctctgattctgactcgcacatgtccagt
cccacctgttctacattcctcagtcctacaaccaacgtcattccagagagtgaggacgag
agcctcatcactccctcctcctcctctgctaaaaacagacccaagaaaatagtgagcttc
agtgaggaggagagcgacatggatggaccgagacagcagcccaggagaagaagagctcaa
gtgatagtggacgacagcgaagaagaggaggaggggaaggaaggcacagaggcactagga
gagaaggaaactggcaaaaggacaagaggaaaggaggatgtgtcagtggtgaaccaggtc
agtcaagctgagagagatcgattaaccccctctgcaccaatggtgtctacagaggacacg
tttaacatggacagtgacacagacgtagagggagaggaggagatggggctgtctgcacct
gtaaatgctgttaagccaccagccgcaacagaacctcctactacagactctgacccaggc
cagatccacatggacagtgatactgatgtagaggaaggggatactatggacagtgactct
aagttaatgctaactgctgccgatgtggagaggaaaccagtagattctgtcccagtggtg
cagccaacagagatacacctggacagtgatacagatgtggatgatgatgatgatgttgtt
gtgtcagacagtgctaccaatgttacctccttcgtatccgatccggctgagaaaccagac
aatcctgcccctgcagtgccacccgtagaattccacctagacactgacacagatgtggaa
gaggaagacacagacacacattccaaaacagttccagaatcagattctagtgggatcaga
acagggattgctggtcaccaggagatccttttggacagtgatactgatgaagaagacaac
ccgtttacccctccggccagcagcagaacagcggagctccttaatccacccaccagtgta
ggacctgcagctgctgctcctctggagatcaggtctgacagcgacacagacttagaggaa
gacgccatacagaccatgaaccttcctcctcctaatgtcaccacggtaacggaggatgcg
gtgttcgcgtcgcgacaggccgtgcttccatcacccacaataacaacaacaaccggtgct
gttaccaagacaatcgctctcaggtctcaggactctgatgctgacacagatgctgaggag
gagaggttggagcccaaacccccccggtgtcggcccccagcagggatggtcccggagtcg
gacctcagtgagcccagtgacttcaggatggacagtgatacggaggaggatggaccaggg
gaggcaggccagggacagactgcatgtctgctcagagagggggcagctggccctgggctg
ctccccctggggggttcctctggccctcatcagaagtgctccacccctttggcatcgtca
gtacaggaggagatggagactcaggccttcttctgtccctctgaccccttcagacgccca
gctctccctcctgtgctgaggcctatagcagcattgtcctgctctgcatcagacagccag
gaggacgatgactttgtggtggccgagacccagtcatttgtgttggaggcccagaaccag
ggccatcagagcagccttccagtggaaccaactctggatgctacacagccctacggtctg
gagccttccttgggggaggagcagcccagccgaggctccttccagctgggtctgtcagac
agcagccacctccacctccaggccagggaccaggcctcagagagcacccaggcattcagc
ttcccaggtggggattctgacctggaggccacccagacctatggatctggaggggggagc
gaggagccttcccttggccagaggtctgcggtgttcaggaggaacaggcagggggattct
gacctggaggccacacagacctatggatctagaggggggagcgaggagcctggcctgggc
cagaggtctgcggtgttcgagaggaacaggcaggtggactttgccctggaggcaacacag
gcttatgctgcccagcctcgcagtgacacagaggaggaagatgaagaggagacccccacc
acgtctaatgttgctacaactgaaaccctgcccatgtctgcctatgaggaagaggacagt
gaggaggaggaagatttggttggggccaagcccctgatcccagtaaggagagggagatct
ggaggagcgagggagagagatgaagaggagcaggagacccagactggtgaggtgctgacc
aaccaatacctctccacagctcaaactctggacatggtccaggagagtgatgatgaggaa
gaagccaaaccagactcgcccagaagaagacggacccaaaaacagacagtagacgaggaa
gagagacagactgtcggctcctacctctccactgctgaaacccagcccatgtttactgct
gctgctgctgaggatgatgatgataatgaggaggaagaactcaaacctccatcacccaga
aggaggggaaggtcccagagaggcagagtagaagaggaggagacacaacctagtgagttc
ctcaccagctcccacatctccaccgctgaaactcagcctatgggtacttgtgacactgag
gaagaggaggaggaggacaccaaagctaaaggacaggctcagagagagcgagggaaagag
tcggaggctgggacaagcggtgtcagcagtagaggtagaagaggagctagaggaggagag
gaggagagctctgagactctgaaaacgcagatgagagggaaggggaaggctgtgaacacc
gcgggaggcggagggaggagagaggtgttgcctgaggaggaagagagtgagaaagaagaa
gaggcggaggtggttgagcaagggaggaggggaataggaagaaagagtgtgaaacaacag
aaagagggagaaaaagaaagacttgaggaggaacggagagaggaggaagagggaatagag
aaggaaagacaagaacaggctgagaaggaacggttgcagaaggaaaaagtagaatcagaa
agggttatgaaggaacaacaggacagagagaggatggaacaggaacttaaagaacaagat
gagagattagagagtgtggaaagagaaaaaacagaaaggatggagagagagaaaagagaa
gaaacagaaaggatggagagagagaaaagagaacaggagaaaagagaagaaacagaaagg
atggagagagagaaaagagaagaaacagaaaggatggagagagagaaaagagaacaggag
aaaagagaagaaacagaaaggatggagagagagaaaagagaacaggagaaaagagaacag
gagaaaagagaagaaacagaaaggatggagagagagaaaagagaagaaacagaaaggatg
gagagagagaaaagagaacaggagaaaagagaagaaacagaaaggatggagagggagaaa
agagaagaaacagaaaggatggagagagagaaaagagaacaggagaaaagagaagaaaca
gaaaggatggagagagagaaaagagaagaaacagaaaggatggagagagagaaaagagaa
caggagaaaagagaagaaacagaaaggatggagagagagaaaagagaacaggagaaaaga
gaagaaacagaaaggatggagagagagaaaagagaacaggagaaaagagagcggcttgag
agggaaaggaaggaacgagaagagcaagaaagactgcagtgcgagaggacaaaaagagaa
aagaaggagagattagaggaagaaaaagaaagaatagagcgggagaggaaagaaatagaa
gagaggaacagactggagagggaggaaaaagagaagcaagaacgattggagagagaaaac
agggaaagggaagcgcttgagcgatcggagagagaaagggtggagaaagagaggatagag
ggagaacaagcagaaaagcaaagattggagaaagaaaaaatggaaagggaagagaagaga
aaacaggagagagaactattgaagaagaaaaaggaagaggagagaaacctgaaagaaaaa
ctggagagggagaagaaggaaagagaaaagagggaagcagaggagaaagaaaaggagata
aaagaacgacaggcgaaggaacaaggagaaaaacaagccaagaaagacgacgaaaatgag
ctaaaaacatccaggagaggtcgcagagcagcaaccaggagaaccgtcacggttccaccc
acaacggaaccacaacctgaacttaatattctgtccagcacaccagaaccagtcccagct
agtataactaggtctcgctccaactcttccaactctgtcagctctgagagatccagcata
gacaccctggggagcagagggagagggggcaggaagaccaccagcaccacagagccagcc
ccggatccagacaaccccacccgcaacagcaccaggagaaggacgttggtcgggacggtt
gtggctccccctgctgctgtggaggtcacagcgcaggacattctctccagcgaacagttt
gttgccaggagaacccgctccagctccaccaactcccacagctccaccaactcggaggtc
tccacctgtatcgtggatagcgtgagctctcagagcaaagggaggggaggaggcagaagg
aggaagactgggacagagtctctctcccccagtaacaggcagagtgagcagcctccagcc
cccaagcccacagccagaggcaggagaagccagaaggttgaggatgatggtccacaccct
gttattaatgagaaggctgattctcaggaggctggtggtaccactagagggcagaataaa
actgccaaaaccaatgagccagaccctgtagtagcagatgaagaaaccactccagcccag
gtaacagaggactcccccgctcctagagggaatggaagaggccggggccgagccggccag
aaagacaacacacctgaatccaccactacaacagcaggaggggacactccaagtgaagag
ggactggagtctaaaacaggtgggagagggaaagggaggaagagggggctggaagaggag
gaggaggaggagaacagtgggttcaaggttccccggaggaaagctaaggttcagagggga
gggagatgcagggcagcagaggagaaaggagagaaagaggagaaacctgcatccactcca
gcaaagagaggcagagcctccactgcacaggtgaaaaagatagcagaggaggagaagagt
atggcgggacagagtgagaagatggaagaggaagaggctagtgctgtgcagaggaaagtc
cgaggcaggcagtcgacggttcagataaagaagaaagaggaacctgttttggactctgtg
gtgccccagacccctacaggtaagggcagaggtaaacgtagggcccctgtggaatcatca
ccactagccaggacccctcgctcctcctctgcctctcccctgtcctccctctcctcccct
gggacactgggcccagcgagggccgccacgcattcctacaaggtgttgtttacaggagtg
gtggatgaggagggggggaaggtggtgtcttgtctggggggcagcctggcgaagggcgtg
gctgacatgacccacctggtgactgaccgggtccgacgcaccgtcaagttcctgtgtgct
gtggcccgcggcatgcccgtcgtcaccaccgcttggctggataagtgtggtaaggtgggt
catttcctacctactgacaggtacctggtgaaggatagggagcaggagaacaagttcagc
ttctgtctggaggaatcactgaggaccgccagcacccaacctctactacagggttatgag
gtccatgttaccaggtcagtgttgccagagccagcccagatgaaggacatcatcatctgt
agtggagctcgcttcctctctacgatgccctccactcagaaggcccaggcccggacccta
gtgatatcgtgtggggaggactggtctctctgtgctcctgctctctctgcttctctcccc
gtcctcagtgctgagttcctgctaactggtatattacagcagagagtggacctggtaacc
catgtcctctcagcccccaaacccagggcccagccaggagccaaaggccaggccaggggg
aggaagagaatgtaa

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