Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424302
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Entry
139424302 CDS
T10872
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139424302
03041 Spliceosome [BR:
ocla03041
]
139424302
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139424302
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139424302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_NusA_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
139424302
NCBI-ProteinID:
XP_071032104
LinkDB
All DBs
Position
13:complement(4478690..4496216)
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AA seq
673 aa
AA seq
DB search
MSDYGSPGAGAGAGGKKDAFADAVQRARQIAAKIGGDAGPPSNNGGAGGGEGFPFQTLKR
SLEDGDQPDAKKMSSQGDRDSATALSIGAQLAALSQQSVRPSTMTEEYRVPDGMVGLIIG
RGGEQINKIQQDSGCKVQIAPGEQLDSGGMPERSVSLTGNPDAIAKAKMFLDEIVSRGRG
APSSSFHESTNGQSGSMQEMMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPN
MDKPLRIIGDPYKVQQAKELVNEILRERDHAGFGDRNNFGNQMGGGGGGGGGGMDVPVPR
HSVGVVIGRSGEMIKKIQADAGVRIQFKPDDGAGPDKIAHIMGPPDRCEHAASIINELLQ
SIRVREDGGQGGPPGPPGTGGMPQGGHGRGRGQGNWGGPPGGEVTFSIPAHKCGLVIGRG
GENVKAINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEDKIEAPLCPLG
GGPGGPGPAGPMGPYNPNPYNPGPGGPGGPPHGGPPGGHGYGAPQGWGNTFQQWQAPGGP
HDPNKAAADPNAAWAAYYAQYYQQQPGGAMPGQAPNAPAAAPVQADPSQAAQTPGGQPDY
TKAWEEYYKKMGMAQPGGGAAAAPAAAVAGGGAGGQQDYSAAWAEYYRQQAAFYGPGGAP
GQAATPQQGQQAQ
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacggctcacccggggccggagcgggcgctggaggcaaaaaagatgctttc
gcggacgccgtgcagcgagccagacagattgcagctaagatcggaggagatgccggacct
ccaagtaacaatggaggagcaggaggaggagagggcttcccgttccaaacactgaaacgc
tctctggaggatggagaccaaccagatgccaagaagatgtcttcccagggggacagagac
tcagccactgctttgtctatcggagctcagctcgctgccctgtctcagcaaagtgtcaga
ccctccaccatgacagaggagtacagagtgccagacggcatggtcggactcatcattggt
cgagggggcgagcagatcaacaagatccagcaggactcgggctgcaaggtccagatcgct
ccaggtgagcaactagacagtggtggcatgccagagaggagcgtctccctcacaggaaac
cctgacgccatcgcgaaagccaagatgtttctggatgagattgtatctcgggggcgcggt
gctccttcctcctctttccacgagtcgaccaatgggcagagtggctccatgcaggagatg
atgatcccagctggcaaggccggcctaatcatcggcaagggaggagagaccatcaaacaa
ctgcaggagcgtgctggagtgaagatgatcctcatccaagatggttcccagccacccaac
atggacaaacccctgcgcatcatcggagacccctacaaagtacagcaagcgaaggagctg
gtgaatgagattctgagagagagagatcacgctggctttggagaccgaaacaattttggc
aaccaaatgggaggaggaggtggtggaggaggaggaggcatggatgtgcccgtgccccgc
cactctgtgggagttgtgattggtcgaagtggagagatgatcaagaagatccaggcagac
gctggagttaggatacagttcaaaccagatgacggtgcaggtcctgataagatagcccac
atcatgggccctccagaccgctgtgagcacgctgcctccatcatcaacgagctgctgcag
agcatcagagtcagggaggacggaggacaggggggtcctccaggtccaccaggcacgggg
gggatgcctcagggtggccatggcagggggcgaggccagggcaactggggcggtcctccg
ggaggtgaggtcaccttctctatccccgcccacaaatgcggcctggtgattggtcggggt
ggcgagaacgtcaaggccatcaaccagcagacgggggctttcgtggagatctcgcgtcag
ccgccgcccaacggggaccccaacttcaaactgttcatcatcagggggtcccctcaacag
atagatcacgccaagcagctcatagaggacaagatcgaggctcctctgtgtcctctaggg
ggaggtcctgggggacctggtccagctggtccaatgggcccctacaaccccaacccttac
aacccagggcctggtggccccggaggacccccgcatggcggccccccaggtgggcatggt
tatggggcccctcagggctggggaaacacgttccagcagtggcaggcccctggagggcca
cacgaccccaacaaggcagcagcagaccccaatgcagcgtgggcagcctactatgcgcag
tactaccagcagcagccagggggcgccatgccgggccaggcccccaacgccccagcagcc
gccccagtccaggcagacccctcccaggcagcccagacccctggaggccagccagactac
accaaggcctgggaggagtattacaagaagatgggcatggcccagcccggtggaggtgct
gcagcagcgccggctgcagccgtggccgggggaggagccggcggacagcaggactacagt
gcagcctgggctgagtactataggcagcaggcggccttctacggccctggaggggctccg
ggacaggctgccaccccacagcaaggacaacaggcccagtga
DBGET
integrated database retrieval system
